| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4430 |
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| Symbol | hslU |
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| ID | 6118785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5366507 |
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| End bp | 5367832 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635992 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_001762777 |
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| Protein GI | 170728751 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.193952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTGAAA TGACCCCACG TGAGATTGTC CATGAGTTAG ACAGTCACAT TATTGGCCAG
CACAATGCAA AACGCTCAGT TGCTATCGCC CTGCGAAATC GCTGGCGCCG TATGCAACTA
GACGCAGATT TCCGTCAGGA AGTCACTCCA AAAAATATCC TCATGATTGG CCCAACTGGT
GTTGGTAAAA CTGAGATTGC CCGTCGCTTA GCTAAGCTTG CCAGAGCGCC TTTTATCAAG
GTTGAAGCGA CTAAATTCAC CGAAGTGGGT TATGTCGGTA AAGAGGTTGA ACAGATCATT
CGTGATCTTA CTGATTCGGC CATCAAACTG ACTCGTGAAG AGCAGATGAA GAAATGCAAA
TTCAGAGCTG AAGAAGCTGC TGAAGAGCGC ATTCTTGATG CTCTGCTTCC AAAAGCAAAA
GAGGATTGGG ATAATGAAAA GCCTGATGAC TCTGCAACTC GCCAAGTCTT TCGCAAGAAG
CTACGTGAAG GCCAGTTAGA TGACAAAGAG ATCGAAATAG ATGTCTCTGC ACCTCAGGTA
GGTATTGAGA TCATGTCTCC ACCTGGCATG GAGGAGATGA CCAATCAACT TCAAAGCATG
TTCCAAAATA TGGGGCTTGG TGCCAGCAAA CGTCGCAAGA TGCCAATCAA AGAAGCCTAC
AAGCTGATGG TTGAAGAGGA AGCGGCTAAG CTCGTCAATC AAGACGATCT AAAAGAGCAG
GCTATCGAAC TGGTTGAACA GCATGGTATT GTCTTCTTAG ATGAGATCGA TAAGATCTGT
AAACGAGGCG AAGCTTCAGG TCCAGATGTA TCACGTGAAG GCGTTCAACG AGATCTACTG
CCACTGGTTG AAGGTTGTAC CGTAAATACC AAACACGGCA TGGTGAAAAC AGACCATATC
CTATTTATCG CTTCTGGTGC GTTCCAGATG TCAAAGCCTT CGGATCTGAT CCCTGAGCTA
CAAGGTCGAC TCCCTATTCG TGTGGAGCTC GATGCATTAA GTGCCGATGA CTTTAAACGT
ATCTTAACTG AGCCACATGC ATCACTTACC GAGCAACAGA TCGCACTAAT GGGCACTGAA
GGTGTAAAGA TTGAGTTCAC CGAAGATGGT ATCGAAAGTA TCGCTCAAGC GGCATGGCAG
GTGAATGAGC GCACTGAAAA TATCGGTGCA CGTCGTCTAC ACACGGTAAT GGAAAAGCTA
ACTGAGGAGC TCTCTTACGA GGCATCAGAT AAATCAGGTA GCACTATCGT TATCGATGCT
AAATACGTTA GTGATCATTT AGATAACTTG GTACAAGATG AAGATCTAAG CCGCTTTATT
CTATAA
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| Protein sequence | MSEMTPREIV HELDSHIIGQ HNAKRSVAIA LRNRWRRMQL DADFRQEVTP KNILMIGPTG
VGKTEIARRL AKLARAPFIK VEATKFTEVG YVGKEVEQII RDLTDSAIKL TREEQMKKCK
FRAEEAAEER ILDALLPKAK EDWDNEKPDD SATRQVFRKK LREGQLDDKE IEIDVSAPQV
GIEIMSPPGM EEMTNQLQSM FQNMGLGASK RRKMPIKEAY KLMVEEEAAK LVNQDDLKEQ
AIELVEQHGI VFLDEIDKIC KRGEASGPDV SREGVQRDLL PLVEGCTVNT KHGMVKTDHI
LFIASGAFQM SKPSDLIPEL QGRLPIRVEL DALSADDFKR ILTEPHASLT EQQIALMGTE
GVKIEFTEDG IESIAQAAWQ VNERTENIGA RRLHTVMEKL TEELSYEASD KSGSTIVIDA
KYVSDHLDNL VQDEDLSRFI L
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