| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4379 |
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| Symbol | |
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| ID | 6118734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5304888 |
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| End bp | 5305775 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635941 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001762726 |
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| Protein GI | 170728700 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5309] Exo-beta-1,3-glucanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCAAGA ACTACAACAA ATATATGTCG TTAGCTGGCG TTAATTTTGC CAACTTAACC
ACAGATGCAC TACGCACTCT GGCGGTCGAT ATCCTTTCAG AGAAGATACA TGGTATCTCC
TTTAGTCCCT ATACAGAGGG ACAAAAACCA GGGAATGATA TTACCGAGGC GCAGATTAAA
GATAGATTGG ATATTATCAA GCCAAATGTT AACTGGGTTC GCTCTTTCTC CAGTACAGAA
GGTAATCAAC ATACCCCGAA AGTGGCTAAA GAAAATGGCC TGAATACCTT AGTAGGAGTC
TGGCTTGATG GCGATTTAGA AAACAACGAG AAAGAGCTCG CCAATGCCAT TGAAGTTGCT
CGTGCTGGCC ACGTCGATAT TCTCGCAGTT GGCAACGAGG TCCTGCTCCG AGGTGAGCTG
TCTGAAGATG CGTTAATCGC CTATATCAAA CGGGCGAAAC AAGCATTACC CGATATTGAA
GTTGGCTATG TTGATGCCTA CTTCAAGTTT GAAGACTACC CCAAAATAAC TGAAGCTTGC
GATGTGATTT TGGCCAACTG CTACCCTTTT TGGGAAGGCT GCCCCGCAGA TTATTCACTT
CTTTACATGA AAGATATGTA TCGCCGCGCT GTAAAAGCCG GTAGAGGAAA GCGAGTTATC
ATCACCGAAA CAGGCTGGCC TAATCAGGGA ACAGCTGAGA GAGGGGCCAT ACCGTCATTT
GATAATGCTT TAAAGTACTT CATAAATACC TACCTCTGGG CTGAGGAGGA GTCTATTGAG
GTGTTCTATT TCTCCTCTTT CGATGAAACT TGGAAGATAG AGGATGAGGG TGATGTTGGC
GCGTATTGGG GACTTTGGAA TAAGGATGGA AAACTGAAAT ATGTTTAA
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| Protein sequence | MSKNYNKYMS LAGVNFANLT TDALRTLAVD ILSEKIHGIS FSPYTEGQKP GNDITEAQIK
DRLDIIKPNV NWVRSFSSTE GNQHTPKVAK ENGLNTLVGV WLDGDLENNE KELANAIEVA
RAGHVDILAV GNEVLLRGEL SEDALIAYIK RAKQALPDIE VGYVDAYFKF EDYPKITEAC
DVILANCYPF WEGCPADYSL LYMKDMYRRA VKAGRGKRVI ITETGWPNQG TAERGAIPSF
DNALKYFINT YLWAEEESIE VFYFSSFDET WKIEDEGDVG AYWGLWNKDG KLKYV
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