Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4362 |
Symbol | |
ID | 6118717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5273993 |
End bp | 5274961 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641635925 |
Product | ABC transporter related |
Protein accession | YP_001762710 |
Protein GI | 170728684 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGCT TAAGTCGCTC CTCCGAACTC GCTATCGATG CTAAGGGGCT CACTAAGAAG TTCGGTCAAC TGGCTGCCGT ATCTGATCTA AACCTGCAAG TGCCTAAGGG GCATATTTAC GGCTTTCTTG GACCTAATGG CTGTGGTAAA TCCACCAGCA TACGTATGTT AACTGGCTTG CTAACACCCA CTGAGGGCTC CATTCAAGTA TTAGGCATGT CGATACCCAA ACAAGCCGAA GCACTCAGGT TACGAATAGG CTATATGACC CAGAAGTTCT CCCTCTATGA GGATCTTACC GTCAAGGAAA ACCTAGAGTT TATCGCCCAG ATCTACTGCC TGAGTCCCAA TGACAGTCAT AGCAAAATAT CTAAGTTGAT CAGCACCTAT AACTTGCTCA AACAGCAACA TCAGTTTGCA GGCACCTTAA GCGGAGGACA AAAACAGCGA CTATCACTGG CCTGTGCCTG CCTTAACGAT CCTGAACTAC TGTTTCTCGA TGAGCCCACC TCGGCTGTTG ATCCACAAAA CCGGCGGGAT TTTTGGGAGC AGCTGTTCGA TCTATCTGAA ACTGGTACCA GTATCTTGGT CACCACCCAC TATATGGATG AAGCGGAGCG TTGCCATGGT CTTGCGATTA TGGAGCAAGG TTTTATCCGC GCCGATGGCA GCCCCAATGA TTTAATGCAG CAGATGGGCG CAAATGTGCT CGAAGTGAGT CACTCTAACC TAAGGGAGCT TAAAAACTCC CTGACCACCT TTAAAGAGAT CAAATCCGCA GCCCAGCTCG GCTCTCGCTT ACGGGTTTTA GTCGACAATA GAGTCACCGA TCCCGCTACT TGGCTAAGGC AGACAATGCC AACTCTACAT CAAGCTGAGA TAAGACTCGC CCCACCTAAC CTTGAAGATG TGTTTGTGAC AGTCACTGGC CAACAGCCTT CCTCCTCACT AACCTCGGCG GAGGTGTAA
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Protein sequence | MSSLSRSSEL AIDAKGLTKK FGQLAAVSDL NLQVPKGHIY GFLGPNGCGK STSIRMLTGL LTPTEGSIQV LGMSIPKQAE ALRLRIGYMT QKFSLYEDLT VKENLEFIAQ IYCLSPNDSH SKISKLISTY NLLKQQHQFA GTLSGGQKQR LSLACACLND PELLFLDEPT SAVDPQNRRD FWEQLFDLSE TGTSILVTTH YMDEAERCHG LAIMEQGFIR ADGSPNDLMQ QMGANVLEVS HSNLRELKNS LTTFKEIKSA AQLGSRLRVL VDNRVTDPAT WLRQTMPTLH QAEIRLAPPN LEDVFVTVTG QQPSSSLTSA EV
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