Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4359 |
Symbol | |
ID | 6118714 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5270130 |
End bp | 5271809 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641635922 |
Product | alkylglycerone-phosphate synthase |
Protein accession | YP_001762707 |
Protein GI | 170728681 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTAAGT CACAACAGGA TAATCGTCAG TGGAATGGGT GGGGTGATAG GGAGAAAAGC CTAGCACTCA CTGCTGATGG TGCGAGTTTT ATCACTGAGA CATTAGGTCT AGCGACTCCT TTGCCCGTTG CAACTTTGGA TGAGGTGTTG GCGAAAGTAC CTAGGTCTCG TCTCGATAAG AGTGAACTTT ATACCTGTGA TGCCGAGGTG CGAGTGCGTC ACGCTCGTGG TCAAAGCTTA CCGGATTGGT TGGCGATGAA GAGCGGTGAG TTTAACCTCT TTCCAGACGG GGTGGCTTTT CCTAGAAGCA GTGAAGATAT CCGTATTTTA ATGGCAGAAG CCAAAGAGCA AGGGTGGCAG CTTATCCCCT ATGGCGGCGG CACTTCTGTG GTGGGGCATA TCACCCCCAC TGTTTCAGAT AAGCCAGTGC TAACCATCTC CATGGGTAAA ATGAACCGCT TGCTTGATCT CGATAGGGTG GATCAAATCG CTACATTTGG CGCCGGCGTT AAGGGGCCAT TTCTTGAGTC TCAACTGCAA GCTCAGGGTT TTACTTTAGG TCACTTCCCT CAATCTTTTG AACTCTCGAC CTTAGGAGGT TGGGTGGTTA CCCGCTCTAG TGGTCAGCAG TCTTTAGGTT ATGGACGGAT TGAAAACCTG TTTGCTGGAG GTGAGATAGA GACCTTTGAG GGTAAGGTGG AAATCCCCAC ACTACCAGCA TCATCTGCAG GGCCGGATTG GCGTCAATTG GTGCTGGGAT CGGAAGGGCA TTTAGGGATC TTAACCGAGG CAAAAGTGAG GGTGAGTCGC TTACCTGAAG AGGAGTTTTT TGGTGTGGGC TTTATGCCTA ATTGGCAGCA GGGAATAGCT TGCGCCAGAG AGGCGGTACA ACTGGGTTTG CCTCTTTCCA TGCTAAGAGT GAGTAATAGC ATTGAAACTC ATACCCAGCT CTATCTATCG GCAAATCAGA CTCAACGTCA CTGGCTGGCA AAGCTGCTTT CACTGAAAGG GGTGGGTGAT GATAAATGTA TGTTGGTCTA CGGGATCACG GGCGATAAAA AGAGTAATAA GCAGAGTTAT AAGCGACTGA AAGCAGTTAT CTCTCAGTTT AATGGAGTCA ATACGGGTCA AAGCCTAGGT AAAAAATGGG CTCATAAGCG CTTCGCTTTC CCCTACTTGA GGGAGACGTT ATGGCAGATG GGCTATGCCA TTGATACCTT AGAGACCGCG ACTAACTGGT CCAATATTGC CCCGCTTACA GAGAAAATTG AGCAGAGTCT TAGGGAGGGG CTGGCTGACA GCTCTGAATC GCCTGATGCA CCGCAGAGTA AAGTCCACGT ATTCTCCCAC CTATCTCACC TGTATAGTGA TGGCGCCAGT ATCTATACCA CTTATCTATT TCCAGTCTCC GGCACCTATG AAGAGACCTA TGCTCGATGG CAGAGGTTAA AATCCACCAC CTCAAAGTTA ATCGTTGAAA GTAGTGGAAC CATCAGCCAT CAGCATGGCG TTGGTGGCGA TCATGCTGCC TATTTAGTGA GAGAGAAGGG CGAGCGAGTA GTCGATTCAT TGCAAAACTA CTTTAACGCT TTCGATCCCA AGGGCCAGTT AAATCCGGGG AAATTGTTTA AAGGGATCCC AGCTAAATCT CTTCAAAGTC ATGGGAAGCA AGATCAATGA
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Protein sequence | MGKSQQDNRQ WNGWGDREKS LALTADGASF ITETLGLATP LPVATLDEVL AKVPRSRLDK SELYTCDAEV RVRHARGQSL PDWLAMKSGE FNLFPDGVAF PRSSEDIRIL MAEAKEQGWQ LIPYGGGTSV VGHITPTVSD KPVLTISMGK MNRLLDLDRV DQIATFGAGV KGPFLESQLQ AQGFTLGHFP QSFELSTLGG WVVTRSSGQQ SLGYGRIENL FAGGEIETFE GKVEIPTLPA SSAGPDWRQL VLGSEGHLGI LTEAKVRVSR LPEEEFFGVG FMPNWQQGIA CAREAVQLGL PLSMLRVSNS IETHTQLYLS ANQTQRHWLA KLLSLKGVGD DKCMLVYGIT GDKKSNKQSY KRLKAVISQF NGVNTGQSLG KKWAHKRFAF PYLRETLWQM GYAIDTLETA TNWSNIAPLT EKIEQSLREG LADSSESPDA PQSKVHVFSH LSHLYSDGAS IYTTYLFPVS GTYEETYARW QRLKSTTSKL IVESSGTISH QHGVGGDHAA YLVREKGERV VDSLQNYFNA FDPKGQLNPG KLFKGIPAKS LQSHGKQDQ
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