Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4339 |
Symbol | |
ID | 6118694 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5251884 |
End bp | 5253596 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635902 |
Product | formate--tetrahydrofolate ligase |
Protein accession | YP_001762687 |
Protein GI | 170728661 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2759] Formyltetrahydrofolate synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACGG ATATTGAAAT TTCTCGTCAA GCTACACCTC AACCTATTAG TGATATTGCC AAGAAATTTG GTATTAAAAA GGATGAGTTA TCTCAGTTTG GTGATGCTAA AGCTAAAGTA AAGATCTCTA TATTGGACCG TGTTAAGGAC AATGTAGAGG GGAAGTTAGT GATAGTCACT GCCGTAACGC CAACTCCATT TGGTGAAGGT AAAACTGTCA CGAGTATAGG TTTGACCCAA GGGCTAAATG CCATTGGTAG AAAAACCTGT GCTTGTATAC GTCAGCCCAG TATGGGGCCT GTTTTTGGCA TCAAAGGTGG TGCTGCCGGA GGCGGTTACT CTCAAGTTAT CCCAATGGAA GAGATGAACC TCCACCTCAC TGGAGATATT CATGCCGTTA GCAGTGCACA TAATTTAGCG GCCGCGGCTG TTGATGCAAG ACTGTTTCAT GAATCAAGGT TGTCGGCTGA TGAGTATACC CTGCAGTCGG GAAGCGCCCC TTTAAATATT GACCCTGAGC AGATCCTTTG GCGTCGGGTA GTTGATCATA ATGAACGTAG TTTACGTAAC ATTACTGTTG GCCTTGGTGA TATCAATGGT CCCGTTCATG CCTCTGGTTT TGATATTACC GCTGCATCTG AGTTAATGGC TATTTTGGCG CTCAGTCATG ACTTAAAGGA TATGCGTAAA CGTATTGGCC GTTTAGTGTT AGCGCTAGAT AAACATGCTC AGCCTATCAC AGCAGAGATG ATAGGGGTTG CAGGTGCCAT GACGGTGATT ATGAGCAATG CCATCGAGCC AACTTTAATG CAAACTTTGA CAGGGGATCC CTGCTTAATT CATGCTGGGC CCTTTGCCAA TATCGCTCAT GGTAATTCAT CGATTATTGC AGACCGAATT GCGCTCAAAT TTGCAGACTT TGTGGTGACA GAGGGAGGCT TTGGCTCAGA TATGGGCTTT GAGAAGTTCT GTAATATCAA AGTGAGAGAG TCAGGAAAGG CGCCAGATGC AGCGGTTTTA GTTGTGACTT TAAAAGCATT AAAAGCAAAC TCGGGCCTTG AGTCTAAGCA GGATATTAAC TTGCCTGATC AAGCTCGTTT AGAAGCTGGA TTCCTTAATC TTAAATGGCA CATGGATAAT GTCAGTCAAT ATGGGGTTCC TGTCGTGGTT GCGCTTAATC GTTTTCCTAG TGACACCCAA GAGGAGCTTG AGTGGCTGAA GAGGGAGGTG ATGTTAGCTG GTGCTTTTGG TTGTGAGATT AGTGATGCCT TTAGTTTAGG CGCTAACGGA GCCGAAGCTT TGGCTCATAA AGTTGTTGAA GCAACCGAGC AAGATTCTGA TTTCCGCCTG CTCTACTCAA GTGATGCAAG TATTGAAGCA AAACTGCTTA CTATTGCTGA GTCTGGATAT GGTGCGAGGG GAGTCGTTTT ATCCGATGAA GCTAAAGCGC AGCTGGAACA GATAAAAGCC ATGGGGCTTG ATAATCTGGC GGTGTGTATT GCTAAGACGC CACTTTCAAT TAGCCATGAC CCACTGCTAA AAGGTGTGCC TCAAGGGTTT GAGCTGCCTA TTGCCCAGTT AAAGATAAAT GCAGGTGCGG GGTTCATTAC CGCTTTAGTT GGTAAGGTGA TGACGATGCC TGGCTTAGGG GTTAAACCTG GTTATCTTAA CATCGACATT AATGAGCAGG ACGAGATTGT CGGCTTAGCT TAA
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Protein sequence | MLTDIEISRQ ATPQPISDIA KKFGIKKDEL SQFGDAKAKV KISILDRVKD NVEGKLVIVT AVTPTPFGEG KTVTSIGLTQ GLNAIGRKTC ACIRQPSMGP VFGIKGGAAG GGYSQVIPME EMNLHLTGDI HAVSSAHNLA AAAVDARLFH ESRLSADEYT LQSGSAPLNI DPEQILWRRV VDHNERSLRN ITVGLGDING PVHASGFDIT AASELMAILA LSHDLKDMRK RIGRLVLALD KHAQPITAEM IGVAGAMTVI MSNAIEPTLM QTLTGDPCLI HAGPFANIAH GNSSIIADRI ALKFADFVVT EGGFGSDMGF EKFCNIKVRE SGKAPDAAVL VVTLKALKAN SGLESKQDIN LPDQARLEAG FLNLKWHMDN VSQYGVPVVV ALNRFPSDTQ EELEWLKREV MLAGAFGCEI SDAFSLGANG AEALAHKVVE ATEQDSDFRL LYSSDASIEA KLLTIAESGY GARGVVLSDE AKAQLEQIKA MGLDNLAVCI AKTPLSISHD PLLKGVPQGF ELPIAQLKIN AGAGFITALV GKVMTMPGLG VKPGYLNIDI NEQDEIVGLA
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