| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4324 |
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| Symbol | |
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| ID | 6118679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5236336 |
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| End bp | 5239242 |
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| Gene Length | 2907 bp |
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| Protein Length | 968 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635887 |
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| Product | ATP-dependent helicase HepA |
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| Protein accession | YP_001762672 |
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| Protein GI | 170728646 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTTTT CCTTAGGTCA ACGCTGGATA AGTGACACAG AATCTGAACT CGGTTTAGGT
ACTGTCGTGG CTGTGGAAGG CCGTATGGTC ACCGTGATGT TTCCAGCAAC AGATGAGAAC
CGTATGTTCT CTCGAGCCGA TGCGCCGTTA ACACGTGTTA TTTTTAATCC GGGCGATAAA
GCTGAAAGCC ATGAAGGCTG GAGTTTGACC GTTAGTGAAG TTGAAGAGAA AGATAATCTA
ATTATCTATC ATGGCATTCA TGATGAAACT GGTGAGCAGG TCAGCTTAAG AGAGACCCTG
TTAAACCACA ATATTCGTTT CAATAAGCCA CAAGACAGAT TGTTTGCTGG CCAGATCGAT
CGCCTCGAGC GATTTGGTAT TCGTTACCAG TGCCAGCAAC TAAGACACAA ACTAGCCACC
TCAGACATGC TAGGCCTACA AGGCCCTAGA GTCGGCCTGA TCCCTCACCA GCAGTGGATC
GCCCATGAGG TGGGTCGCCG CTTTGCGCCA AGAGTATTAC TCGCCGATGA GGTGGGTTTA
GGTAAGACAA TCGAAGCGGG CCTGATCATC CATCAGCAGC TACTGACCGG TCGCGCCGAG
CGTATCTTAG TAATAGTACC TGACACACTT CGCCATCAGT GGTTGGTTGA GATGCTTCGC
CGCTTCAACC TTAAGTTTTC TGTTTTTGAT GAAGACAGAT GTGTCGAAGC TTACGCCGAT
AGCGACAACC CTTTCTACAC TGAGCAGCTG GTAATCTGCT CATTAGAGCT GCTGCGAAAG
AAACGACGCT TAGATCAAGC ACTCGCTGCT GACTGGGATC TTATGGTTGT CGACGAAGCC
CATCATTTAG AGTGGACGGA AGATGCACCA AGTCGCGCCT ACCGTATAGT CGAAGCGCTC
AGTGAAGAGA TCCCTGGCGT ACTGCTACTG ACAGCAACGC CGGATCAACT CGGTCACCAG
AGTCATTTTG CTCGCCTACG CCTGCTCGAT CCTGATCGCT TCTACGATTA TGAAGCTTTC
CTCAAAGAGG AAACCAACTA CGCAGATATC GCCAGCACCG CAGATGCACT AGCAGGCAAT
GAGCCGCTTT CACAGGAGAT AATTGATAAT CTCAAGACGC AACTAGCTGA AAAAGATATC
ACAGCGGCAA CCGACATTAT TCAAGCGACT GACGCAGATG TTGACCAGCA GCAAGCTGCC
CGTGATGCAC TACTGCAAGA CTTGTTAGAC AGACACGGAA CTGGGCGCGT GCTCTATCGT
AACAGTCGCG CCTCAGTAAA AGGCTTCCCA ACGCGTATCT TCAATCAATA TCCACAGAAG
ATGCCGGCAC AATATGTCAC CGCTGCACGT GTGGGCGCCA TGATGAATGG CCATCTAGAT
ACGGCAGGGA AAGTTAAACA AGCACTAAGC CCTGAGAAAA TATACCAAGA ATTTGAGAGC
TCAAGTGCAA GTTGGTGGAA GTTTGATCCT CGCGTTGACT GGCTTATCGA TTTCCTAAAA
GAGAACCGCA GAGAGAAGGT GCTTATTATC GCCAGTCAGG CGGAAACAGC CCTAAGCTTG
GAAGAGGCAC TACGTACCCG TGAAGGTATA CAGGCGACAG TGTTCCATGA AGGGATGTCG
ATTATCGAAC GTGATAAGGC CGGCGCTTAC TTTGCTCAAG AAACAGGTGG AGCTCAAGCC
CTTATCTGTT CAGAGATCGG CTCAGAAGGA CGTAACTTCC AGTTTGCTAG CCAGTTGATC
TTGTTCGATC TACCGTTAAA CCCAGATCTA CTTGAGCAGC GTATCGGCCG CTTAGATCGT
ATCGGTCAGA ACAATGATGT CTCGATCCAT GTGCCATACC TTGAAGATAC AGCGCAAGAG
TCTCTCATGC AGTGGTATCA CAAAGGATTG AATGCCTTTG AGCAGACCTG TCCAAGTGGT
CATATCCTGT TTAATGAGTT TTCAGAGTCA CTGCTCAATG TCTTAATAAG CCAAGATAAA
GAGGTACTAG AGCAGGTTTT AAGTGACACC CAAACCCGCT ATGCAGAGCT AAAGTCTGTG
ATGGAGCAGG GTCGCGATAA GTTGCTTGAG ATAAACTCTC ACGGTGGTGA GCGAGCTAAT
AAGCTAGTCA ATGCCTTAGC AGAGCGCGAT GAAGATACCA ACCTTATCGG TTCGGTGATC
CGTCTGTGGG ATATTATCGG TGTTGAGCAG GAAGATAGCG GCGAGAATGC CATTGTGCTT
CGCCCGAGCG AGCATATGAT GTTCCCAACT TATCCTGGCC TACCGGAAGA TGGCATTACC
GTCACTTTCG ACAGAGAGAT GGCGCTTTCT CGTGATGATA TCGCGCTTAT CACTCAGGAG
CACCCGCTGG TGCAAACGGG CTTAGATCTG ATCACGTCAT CGGAAACCGG CACCACAAGC
GTCGCTGTGT TGAAAAACAA GTCTCTGCCT GCTGGCACGA TATTTCTTGA GTTGATCTAC
ATGGCTGATG CTTCTGCGCC TAAGTCGAGC CAACTATACC GTTATCTGCC ACCTACACCG
GTGCGTGTCC TGCTGGATAA AAATGGCAAT AACTTGGCCG ATAACGTCAA TTACGAGAGT
TTTAATAAGC AGCTAAGCGC CGTAAACCGC CATATTGCCA GCAAGCTGGT CAATGCATCA
CAAGCAGTAC TGCACCCTCT GTTTGCCAAA GGTGAAGAGT TTGCATCTAG CGAATTGACC
TTATTGACTG AGAGCTCGCG GGCTAAAATG ACCACGCAAC TTAACGGTGA GCTGGAGCGT
TTAGAGGCAT TAAAAGCGGT CAACCCGAAT ATTCGTGATG AGGAGCTAGC ACACCTACGC
GAGCAGATGG TAGAGCTTAA CGGCTACCTA GACGGAGCAG TACTACAGCT CGATGCTATA
CGTTTAGTGC TGGTTAGCCA CGCATAA
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| Protein sequence | MPFSLGQRWI SDTESELGLG TVVAVEGRMV TVMFPATDEN RMFSRADAPL TRVIFNPGDK
AESHEGWSLT VSEVEEKDNL IIYHGIHDET GEQVSLRETL LNHNIRFNKP QDRLFAGQID
RLERFGIRYQ CQQLRHKLAT SDMLGLQGPR VGLIPHQQWI AHEVGRRFAP RVLLADEVGL
GKTIEAGLII HQQLLTGRAE RILVIVPDTL RHQWLVEMLR RFNLKFSVFD EDRCVEAYAD
SDNPFYTEQL VICSLELLRK KRRLDQALAA DWDLMVVDEA HHLEWTEDAP SRAYRIVEAL
SEEIPGVLLL TATPDQLGHQ SHFARLRLLD PDRFYDYEAF LKEETNYADI ASTADALAGN
EPLSQEIIDN LKTQLAEKDI TAATDIIQAT DADVDQQQAA RDALLQDLLD RHGTGRVLYR
NSRASVKGFP TRIFNQYPQK MPAQYVTAAR VGAMMNGHLD TAGKVKQALS PEKIYQEFES
SSASWWKFDP RVDWLIDFLK ENRREKVLII ASQAETALSL EEALRTREGI QATVFHEGMS
IIERDKAGAY FAQETGGAQA LICSEIGSEG RNFQFASQLI LFDLPLNPDL LEQRIGRLDR
IGQNNDVSIH VPYLEDTAQE SLMQWYHKGL NAFEQTCPSG HILFNEFSES LLNVLISQDK
EVLEQVLSDT QTRYAELKSV MEQGRDKLLE INSHGGERAN KLVNALAERD EDTNLIGSVI
RLWDIIGVEQ EDSGENAIVL RPSEHMMFPT YPGLPEDGIT VTFDREMALS RDDIALITQE
HPLVQTGLDL ITSSETGTTS VAVLKNKSLP AGTIFLELIY MADASAPKSS QLYRYLPPTP
VRVLLDKNGN NLADNVNYES FNKQLSAVNR HIASKLVNAS QAVLHPLFAK GEEFASSELT
LLTESSRAKM TTQLNGELER LEALKAVNPN IRDEELAHLR EQMVELNGYL DGAVLQLDAI
RLVLVSHA
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