| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4285 |
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| Symbol | |
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| ID | 6118640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5190779 |
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| End bp | 5191666 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 641635850 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762635 |
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| Protein GI | 170728609 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCATTAC CTGAATTCAA AATGACCCAA CTACGCCACT TTATTTGGGT TGCAGAGTTA
AAAGGCTTTC ATGCTGCAGC AAAGAAAGCA TGCCGAACTC AGCCTGCAAT TTCATTATCA
ATTCGAGAAC TGGAAAACAA GTTAGACACA GCCCTTTTTG AAAAGGAGAA TACCAAGAGT
ACAATATTAA CTCCTTTCGG AAAATATTTT TTACCTAAAG CAAAAGAGCT TATTTTTCAT
CATGATAATC TAGCTCTTGA TATGGAGTTA ATGTGTGAGC ATAAAACCGG GCATTTGCGC
CTTGCTTCTG TTCCCTCTAT TTCCAGTCGA ATGTTACCCG ACTTACTATC AAAATTTATT
AATGATGTTC CAGAACTTCA GATAAGTTTG TACGATGATA ATTCGGAGGC CGTGTTGAAA
AAAATTGAAA AACAGCAAGT CGATATTGGT ATATCTAGCT TACCCTATAA AAATGAGCAT
ACTGATATTA GATTTACGCC AATATGGAAA GATCAACTCG GAGTTGTATG CCATAAAAAC
AATCCCCTTG TAAAAAAAAC TGAGCTGCAC TGGAGAGAAC TGCGTAAGCT ACAGTTGATT
AGAAATGGAA CTTCACGCCT ACTAGAAGAC ACGGAAGCAA AACCTTTACT AAATGACTCA
CAGTTATTCA TCTCTACTAT GATCTCATTA ATTGCAATGC TAGAAGCTGG ACTTGGGATC
ACCACATTGC CTTGGTTCGC CTTCCCTGAG AATAACAAAA AACTACGATT TATCCCGCTT
AAAACTCCTA CTGTGATGCG TCAAACTGGG ATCGTTCAGC TCAAAAATAA ATCCTTATCT
CCTGCAGCAT CGGCTCTAAA AAACTTCATT ATAAAAAACA TAAATTAA
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| Protein sequence | MSLPEFKMTQ LRHFIWVAEL KGFHAAAKKA CRTQPAISLS IRELENKLDT ALFEKENTKS
TILTPFGKYF LPKAKELIFH HDNLALDMEL MCEHKTGHLR LASVPSISSR MLPDLLSKFI
NDVPELQISL YDDNSEAVLK KIEKQQVDIG ISSLPYKNEH TDIRFTPIWK DQLGVVCHKN
NPLVKKTELH WRELRKLQLI RNGTSRLLED TEAKPLLNDS QLFISTMISL IAMLEAGLGI
TTLPWFAFPE NNKKLRFIPL KTPTVMRQTG IVQLKNKSLS PAASALKNFI IKNIN
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