| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4254 |
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| Symbol | |
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| ID | 6118609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5153473 |
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| End bp | 5155662 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635820 |
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| Product | decaheme cytochrome c |
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| Protein accession | YP_001762605 |
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| Protein GI | 170728579 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.353597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000280036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATAAAAA CAAATAAGAA AAAAATATGG TTAGTACTCG CTGCAGCTAT GACTATGGGT
GTAGTGGGAT GTTCGGGTGA TGATGGAAAA GATGGTAGTG ATGGTGAGAA TGGCGGTAAT
GGCAATGATG GTGATGCGGG AACGTCCGGT TTACATATCG ATATGGCCAA TGAAGCGATT
GCAACTATCA CTAATGCGAC ATACGCAGAA GGCATAATCA CGGTTGATTT TGATCTGGAA
AATAAACAAG GAGTGGGATT ATTTGGCCTA AGTGGGACCA ATGAATACCA TGACTTCCGT
TTCTCTTTAG CTCAGCTTGA AACTGATACA GGCAGTGAAC TAAAGCAGTG GATCTCTCTG
TTAAATGAAA CCACCAATGA TACTGGCACG ACGTTCGAGC AAGGCTTTGA AAAAATCAAA
GACTGCAGTG AATGTTTAGT CGATAACAAA GATGGTACTT ATACCTACAA CTTTAAAACC
AATCTCGTGT CAGCGACTGA TGCGGCTGGG GTAGTATTTG ATCCGGCGTT AACCCAAAGG
ATCGCGATAG AGATGCAGTT TGAGTATGCT TCTGGTCATG AGTTGGCGGA AAACGCTCAT
TATGATTGGA TCCCTGCAAC AAACTCAATT GAAGGGATAG AGAAGCGTGA GTTAGTGACG
CTGGAAACCT GCTACACCTG TCATCAGCCA GATAGTTTAG AGGCTCATGG TGGTCGTCGT
CTGGATCTTG AGAACTGTCA ATCTTGCCAT AATGGTATTG TGACTGACCC TAATGCTGTA
TCGGTTGAGT TAGGGCATAT GGTGCATGCC ATTCACATGG GGCCAGAGCG TGAAGGTAAA
GACGCTGAGG GCAATGTTGT GAAGATGCCA TACACCATAG CGGGTTATGG TGGCGATCAC
GCCTTTGATT ATCCAGCTTT CCCGACTAAA CCATTTATGG ATTGTGCCGT GTGCCACGTT
CAGGATGAGG CTTTAGCGGA TAAAGATCTG TGGTTAGCGA ATGCTAATGC CAACGCTTGT
ACTGGTTGTC ACACTGACTC TCCGGCTCAA CATAAGTCAG ATAAGAACCC TGCACTTGTC
TGTACTGATT GCCATAGCGC GGCGGTACAT ACAGACAGAG AGAAACCTTA TCAAGCTGCC
AAAGACTACA GTGTAGAAGT GAGTGATGTC ACTATCAGTG CCGCTAATCT TATCGAATTT
GAGATGAAGA TTATGGATGC TGAAGGAGCA CTGGTTTCTG AAGCTGAGGT TTACAAGCAG
GGTTACAGCA AGCCATATAT GGTAGTGAGC TGGGATGTTG AGAAAGACTA CCCAGATTAC
AATCAAGCCT CTTATAGCAG CCGTCGTGTT GACATAAAAG ATCCAACTAA GGCGACTTGG
AATGCTGATA ATACGGTTAG TGTTGCAGTG ACGATTAACT TCCCAGTTGA TATTGCCGCA
CGTTCACTTG AAGTGTTGCC AGTACTTAAG GTCTGTTTTG AAGAGGGTAG TGATAAGCGC
ACGGCATGTG ATGCTGAAAA TGCCTATCCA GCCTATGTGC AAACCCCGGC TTACCGTACT
GTGCTAGGTG ATAGTACCGC TGTTGTTGGT GAGCGTCGCT CGATTGTTGA TAATGCATCT
TGTCATGGCT GTCACAGCTA TGAGTTCTAC CATGACTCAA ATGGTGTGAA CTGTATTGCG
TGTCATACCA ATGATAAGAG CTTGAAAGGC AACGGCCAGG CTAGTAATGG TGTTGATCTG
CTTAAATCTA CCAGCTTTAT GTACAAAGCT CATAAGGCAA CTGGCCATGA TAATGGCCAC
GGTGGAAGCG GCACTATACT TAAGACAGAT TGTACAACTT GTCACTCTGC TACAGAGGGT
TATGGTGGTC TGAAGTATGG CTTCGAGTTA GGCCGTAATG GTGGACAAGC TCATGCAGTC
CCAAGTACTC AGAGTCCTGC TGTCGGTGAA GTGGTTGAAA CTTGGTACGC CTCCTCTGAT
GCTGCTGCTT GTATGAGCTG TCACCAGAAG TACCTATCTG ATGCCGCAAT GTCTCATATC
AGAAGTAATG GTGGTTACTT CGGCGCGAAT AAAGATGCGG ACCATATGGT TGATGTGAAT
GATGCAGCTA ACGCAAAAGA TGCCAAGGAA GCATGTGCTA CTTGTCATAG CCCTGAGAAG
ATTATGGCGC ACCACGGTCA TACTCTTTAG
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| Protein sequence | MIKTNKKKIW LVLAAAMTMG VVGCSGDDGK DGSDGENGGN GNDGDAGTSG LHIDMANEAI
ATITNATYAE GIITVDFDLE NKQGVGLFGL SGTNEYHDFR FSLAQLETDT GSELKQWISL
LNETTNDTGT TFEQGFEKIK DCSECLVDNK DGTYTYNFKT NLVSATDAAG VVFDPALTQR
IAIEMQFEYA SGHELAENAH YDWIPATNSI EGIEKRELVT LETCYTCHQP DSLEAHGGRR
LDLENCQSCH NGIVTDPNAV SVELGHMVHA IHMGPEREGK DAEGNVVKMP YTIAGYGGDH
AFDYPAFPTK PFMDCAVCHV QDEALADKDL WLANANANAC TGCHTDSPAQ HKSDKNPALV
CTDCHSAAVH TDREKPYQAA KDYSVEVSDV TISAANLIEF EMKIMDAEGA LVSEAEVYKQ
GYSKPYMVVS WDVEKDYPDY NQASYSSRRV DIKDPTKATW NADNTVSVAV TINFPVDIAA
RSLEVLPVLK VCFEEGSDKR TACDAENAYP AYVQTPAYRT VLGDSTAVVG ERRSIVDNAS
CHGCHSYEFY HDSNGVNCIA CHTNDKSLKG NGQASNGVDL LKSTSFMYKA HKATGHDNGH
GGSGTILKTD CTTCHSATEG YGGLKYGFEL GRNGGQAHAV PSTQSPAVGE VVETWYASSD
AAACMSCHQK YLSDAAMSHI RSNGGYFGAN KDADHMVDVN DAANAKDAKE ACATCHSPEK
IMAHHGHTL
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