| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4244 |
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| Symbol | |
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| ID | 6118599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5144538 |
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| End bp | 5144813 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635810 |
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| Product | phosphotransferase system, phosphocarrier protein HPr |
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| Protein accession | YP_001762595 |
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| Protein GI | 170728569 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0549022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.000000216421 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTAAAT TAGAACGCCA AGTTACCATA TGTAATAAGC TTGGACTCCA CGCCCGCGCC
GCGACTAAAC TAGCCGTTCT AGCATCGGAA TTCGACGCTA AAGTCACGAT TGTACAAGGG
GAGAAACAAG CTTCTGCAGC GAGTGTGCTG GGCTTGTTGA TGCTGGAAAC CGGAATAGGG
AAAACCATTA CCCTGCTCGG TGAGGGCCAA GATGCCTCTG CAGCACTAGA TGCCATCTGC
GCTCTAGTTG ATGCAAAATT TGATGAAGCA AGTTAA
|
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| Protein sequence | MTKLERQVTI CNKLGLHARA ATKLAVLASE FDAKVTIVQG EKQASAASVL GLLMLETGIG
KTITLLGEGQ DASAALDAIC ALVDAKFDEA S
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