| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4242 |
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| Symbol | |
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| ID | 6118597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5143263 |
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| End bp | 5143706 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635808 |
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| Product | PTS IIA-like nitrogen-regulatory protein PtsN |
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| Protein accession | YP_001762593 |
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| Protein GI | 170728567 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.425208 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000263281 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAATTAA GCACCATCCT GCAGCCGGAG TGCACAACTT GCGCCACTCC GGGCAGTAAG
AAAAAGGTAC TGGAACTTAT CAGCGATCTT GCCGCTGTCC AGTACCCAAG CCTTTCCTCT
CAAGAGATTT TTGAAAGTCT TTTAGCTAGA GAGAAAATGG GCAGCACAGG TATAGGTAAC
GGTATAGCGA TTCCACATGG AAGGTTAACC AATATTAGTC AGCCCGTTGC GGTACTCATT
AAGTGCGAAG AGCCTATCTC TTTCGACTCA ATTGATAAAC AGCCGGTCGA TATACTATTT
GCACTATTAG TTCCAGCTGA TCAATGTGAA CAGCACTTAA GCACCCTGTC GGCGATGGCA
GAGAAGCTTA ATGACAAGCT AATTTTAAAG CAGTTACGAA AAACACAAGA CGAGTCAGAA
CTTTATCAGG TGATCACCCA ATGA
|
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| Protein sequence | MELSTILQPE CTTCATPGSK KKVLELISDL AAVQYPSLSS QEIFESLLAR EKMGSTGIGN
GIAIPHGRLT NISQPVAVLI KCEEPISFDS IDKQPVDILF ALLVPADQCE QHLSTLSAMA
EKLNDKLILK QLRKTQDESE LYQVITQ
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