| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4212 |
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| Symbol | rpsF |
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| ID | 6118567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5116221 |
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| End bp | 5116640 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635778 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_001762563 |
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| Protein GI | 170728537 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000271078 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCATT ATGAGATCGT ATTTTTGGTT CACCCTGATC AGAGTGAACA AGTACCTGGC
ATGATTGAGC GTTACACGGG TATTCTTACC CAAGCTGGCG GTCAAATCCA TCGTTTAGAA
GATTGGGGCC GTCGTCAACT GGCTTACCCA ATAATCGAAC TGCATAAAGC TCACTATGTT
CTTATGAACG TAGAAGCAAC TGCTGAGTCG GTTGAAGAAC TTGAGACAGC TTTCCGTTTC
AACGACGCTG TACTGCGTAA CATGGTTATG CGTACTAAAG CTGCTATCAC TGAAGCATCT
CCAATGGCTA AAGCTAAAGA CGAGCGTGAT TCACGCCGTG CTAGCGAAGG CGAGCGTCGT
AGTGCGCCAG CTGAAGCAAC TGAAGAAGTT ACAGAAGCCG CTGAAAAAAC AGCTGAGTAA
|
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| Protein sequence | MRHYEIVFLV HPDQSEQVPG MIERYTGILT QAGGQIHRLE DWGRRQLAYP IIELHKAHYV
LMNVEATAES VEELETAFRF NDAVLRNMVM RTKAAITEAS PMAKAKDERD SRRASEGERR
SAPAEATEEV TEAAEKTAE
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