| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4210 |
|---|
| Symbol | rpsR |
|---|
| ID | 6118565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5115668 |
|---|
| End bp | 5115895 |
|---|
| Gene Length | 228 bp |
|---|
| Protein Length | 75 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 641635776 |
|---|
| Product | 30S ribosomal protein S18 |
|---|
| Protein accession | YP_001762561 |
|---|
| Protein GI | 170728535 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0238] Ribosomal protein S18 |
|---|
| TIGRFAM ID | [TIGR00165] ribosomal protein S18 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.882361 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000251035 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTT ATTTCCGTCG TCGCAAGTTC TGCCGTTTCA CTGCAGAAGG TGTTACCGAG
ATCGATTACA AAGATATCGT TACTTTGAAG AACTATATCA CTGAAAGTGG TAAAATTGTT
CCAAGTCGTA TCACTGGTAC AAATGCTAAA TATCAACGTC AACTAGCTCG CGCTATTAAG
CGTGCTCGTT ATCTTTCTCT ACTGCCGTAC ACTGATTTAC ATCAGTAA
|
|---|
| Protein sequence | MARYFRRRKF CRFTAEGVTE IDYKDIVTLK NYITESGKIV PSRITGTNAK YQRQLARAIK
RARYLSLLPY TDLHQ
|
|---|
| |