| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4175 |
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| Symbol | |
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| ID | 6118526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5077409 |
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| End bp | 5078875 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635737 |
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| Product | carbohydrate kinase, YjeF related protein |
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| Protein accession | YP_001762526 |
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| Protein GI | 170728500 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
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| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCATT TACCCGTTAA TCTGTTTCTC GCTTCTCAGG TGGAAGATGC GGAAAAAGCC
TTTGTTGGAG CTAAAGATAT AAGCATAAAT CAATTAGTGG AGGCTGCTGG AACCAAAGCT
TTCGAGCTAC TCTCCTCATC AATAGACAGA GCTTCCCCAA TACTGTTACT GGCAGGCTAC
GGTAATAACG GCGCTGATAC CTATGTTTGT GCTCGTTTAT TGATTGAAGC GGGTTATCAG
ATCTCCTTAA TGGGGCTTGA TAAAACACAG ATGGGAACTG AAGTGTTATC TGCTCAGTCT
GAGTTTCGTA GAGTGGGCGG TAGAGTAGAG TGTTCTGATA TCGATAAAAT CCTTTCAGCG
TCAATCATTG TTGATGGTCT GCTAGGAGTC GGGTGTAAAG GGGAATTAAG AGGGCAGTTT
AAGCCGATAA TAGAGGCGGT AAACCTAAGT AAAGCTAAGG TTTTCAGCTT AGATATCCCC
TCTGGACTGA ACCCTGACAC TGGAGCGGGA GAGGGGGCTG TTATCGCAAA TGTCACGCTT
ACCTTTGGGG CAGTAAAGCA GGGACTATTA ACTGGCCGAG CAAGAGTCTG CGTGGGAGAG
CTGTTGTTCG CTGATATCGG TTTAACTGAG TATTTATCTC CGCCATCATC AAAAATGATC
TCTTTAGACT TTGTAAGGGA GCAGATTGCT CCCAGAGCAA GGGACTCTCA TAAAGGGGAC
TCGGGTAAGG TTTCTATCAT AGGTGGCGAT ACAGGCATGG CTGGAGCGGT TAGGCTTGCA
GCTGAAGCTT GTTTAAGAGC TGGTAGTGGG TTGGTTACGG TTATCTCAAA GCCTGCACAC
CAATTAGCAG TTAACGCGAC TCGACCTGAA TTGATGTTCT GGGGTTGTGA TCTGGTTGAT
ATGGAGGTTT ACCTCAAACT AGGTTGGGCG GATGTTCTCT TGATTGGCCC CGGACTTGGA
CAGCAAGATT GGGGCTATAA TTTACTTAAA GCTGTAGGAT TAAGTGATAA GCCCTGCGTA
TTGGATGCCG ATGCATTAAA TATGTTAAGC CGTGAGCCCT ATAAACAGGA AAAGTGGGTA
TTGACGCCAC ATTCTGCTGA AGCGGCAAAG CTTTTAGGTA TTACGACTGG TGAGGTGGAG
CAAGATAGGT TTGCGGCTGT TAAAGCAATA CAGACTAAAT ATGGTGGTGT GGCGGTGCTG
AAGGGGCCCG GCACATTGAT TTGTGGCGCT AAAGAGTGTG TTGTCGCACC AGTAGGAAAC
CCAGGCTTAG CAAGTGGTGG AGCTGGTGAT GCCTTAGGAG GTGTTATTTC AGCGCTTATG
GCTCAAGACT TCGACTCCTT CACCGCAGCC AAGATGGGAG TGGTTATCCA TGGTGAGGCA
GCTGATCGCG CAGCATTAGA GGGGGAAAGA GGAATGTTAG CAAGTGACTT AATGCCACAT
ATTAGACACT TAGTTAATAA TCTTTAG
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| Protein sequence | MIHLPVNLFL ASQVEDAEKA FVGAKDISIN QLVEAAGTKA FELLSSSIDR ASPILLLAGY
GNNGADTYVC ARLLIEAGYQ ISLMGLDKTQ MGTEVLSAQS EFRRVGGRVE CSDIDKILSA
SIIVDGLLGV GCKGELRGQF KPIIEAVNLS KAKVFSLDIP SGLNPDTGAG EGAVIANVTL
TFGAVKQGLL TGRARVCVGE LLFADIGLTE YLSPPSSKMI SLDFVREQIA PRARDSHKGD
SGKVSIIGGD TGMAGAVRLA AEACLRAGSG LVTVISKPAH QLAVNATRPE LMFWGCDLVD
MEVYLKLGWA DVLLIGPGLG QQDWGYNLLK AVGLSDKPCV LDADALNMLS REPYKQEKWV
LTPHSAEAAK LLGITTGEVE QDRFAAVKAI QTKYGGVAVL KGPGTLICGA KECVVAPVGN
PGLASGGAGD ALGGVISALM AQDFDSFTAA KMGVVIHGEA ADRAALEGER GMLASDLMPH
IRHLVNNL
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