| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4169 |
|---|
| Symbol | |
|---|
| ID | 6118520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5070993 |
|---|
| End bp | 5072291 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641635731 |
|---|
| Product | GTP-binding proten HflX |
|---|
| Protein accession | YP_001762520 |
|---|
| Protein GI | 170728494 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00885496 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTTTGATC GTTATGAGGC GGGAGAAAAC GCGGTTCTTG TCCATATCGA CTTCTCCGAT
GAGGATAGTA GGGAAGATTT AGTCGAACTA CAACTATTGG TAGAGTCGGC TGGGGCCCAG
TCTGTTGGAG TGATAACAGG AAGCCGTCGT TCGCCTGACC GAAAGTTTTT TGTTGGTTCG
GGGAAGGCCG ATGAGTTAGC GGCTATGGTT GCCGCGACAG AGGCGAATGT GGTGATTTTT
AATCACGCAC TGAGCCCAGC TCAAGAGAGA AATCTTGAGA TGGTGTGCCA ATGTCGGGTA
TTAGACCGTA CTACACTCAT TTTAGATATT TTTGCCCAGA GGGCGCGAAC GTACGAAGGT
AAGTTACAGG TAGAGCTAGC GCAGTTACGC CATATGTCAA CTCGCCTGAT ACGAGGTTGG
ACGCATCTGG AGCGCCAAAA GGGTGGTATC GGTATGCGAG GTCCTGGGGA AACCCAGCTC
GAAACCGATA GACGTTTACT CCGGGGACGG ATAAGCAACA TCAATAAGCG CTTAGCAAAA
GTAGATAAGC AACGTGAACA GAGCCGAAGA GCAAGGCGCC GTAGTGATTT AGCTACTGTG
TCATTAGTTG GTTATACCAA CGCAGGTAAA TCGACTCTAT TCAACTCTCT TACAACATCA
GATGTTTATG CAGCTGATCA GCTCTTTGCC ACACTAGATC CAACCTTAAG AAAGTTAGAT
CTTGACGATG GCAGTATTAT TTTGGCTGAT ACTGTTGGTT TTATTCGCCA TTTGCCACAT
GACTTGGTGG CGGCGTTTAA GGCGACACTG CAGGAAACAC GAGAAGCTGA TCTGTTACTT
CATATTGTCG ACTGTCATGA TGAGAATATG GGGGACAACT TTGAGCAAGT CCAGTTAGTG
CTCAAGGAGA TTGGTGCAGA AGATATCCCG CAACTTATTG TTTGCAATAA AATTGACTTG
TTGGATGAGG TAAACCCAAA GATCGACTAC GATGATGAGG GTGTACCAAT TAGAGTCTGG
GTTTCGGCTC AGAAGCAGCA AGGTTTAGTG TTATTAAAGG AAGCTATCAA CAGTATTGTT
GGTAAGACAA CTTTATCATT AAACCTAGAG ATTCCGGCAA CAGCCGGACA TTATCTTGGT
CAGTTATACC GACTCGATGT GATACAGCAG AAAGAATATG ACGATCTGGG GAACTGTATC
TTGTCTGTTC GCATTTTAGA GGCCGATTGG CGTCGACTTG TGAAGCAGAG CGAAGGAGAG
TTAGAGACTT TTGTTGTCGA ACATTCGGCA GTTGAGTAG
|
|---|
| Protein sequence | MFDRYEAGEN AVLVHIDFSD EDSREDLVEL QLLVESAGAQ SVGVITGSRR SPDRKFFVGS
GKADELAAMV AATEANVVIF NHALSPAQER NLEMVCQCRV LDRTTLILDI FAQRARTYEG
KLQVELAQLR HMSTRLIRGW THLERQKGGI GMRGPGETQL ETDRRLLRGR ISNINKRLAK
VDKQREQSRR ARRRSDLATV SLVGYTNAGK STLFNSLTTS DVYAADQLFA TLDPTLRKLD
LDDGSIILAD TVGFIRHLPH DLVAAFKATL QETREADLLL HIVDCHDENM GDNFEQVQLV
LKEIGAEDIP QLIVCNKIDL LDEVNPKIDY DDEGVPIRVW VSAQKQQGLV LLKEAINSIV
GKTTLSLNLE IPATAGHYLG QLYRLDVIQQ KEYDDLGNCI LSVRILEADW RRLVKQSEGE
LETFVVEHSA VE
|
|---|
| |