Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4168 |
Symbol | |
ID | 6118519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5069810 |
End bp | 5070949 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635730 |
Product | HflK protein |
Protein accession | YP_001762519 |
Protein GI | 170728493 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000320742 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTGGA ATGAGCCCGG TAACAAGGGT AAAGACCCTT GGGGGAATAA GAATGGTAAC GATAAGGGAC CACCAGATCT AGATGAGGTG TTTCGTAACA TCTCTAAACG CTTTGGCGGT GGCAAAGGCA ATGGTTCTGG CTCGAGCTTT AGCTCATTTA GCCTAATCAT CGTTTTAGGC ATTGCTATTG TTGTGTGGGG GCTATCAGGT TTCTATACAG TTAAAGAAGC TGAAAAAGGC GTGGCGCTGA GATTTGGTCA GTATGTTGGT GAAGTAGAGC CAGGTTTACA ATGGAAGGCT ACATTCATTG ATGAAGTATT CCCTGTTAAC GTGAATACAG TTCGTTCAAT TCCTGCGTCT GGAAGTATGT TGACAGCCGA TGAAAACGTC GTCTTAGTTG AGCTTGACGT TCAGTATCGA GTGGTTGATG CATACCGTTT CCTATTCAGC GCCGTTGATG CTAATGCCAG TTTACGTGAA GCAACGGATA GTGCCTTGCG CTATGTTGTT GGTCACAACA AGATGGATGA CATCTTAACT ACTGGTCGTG ATCAGATCCG TCGTGATACT TGGGCTGAAG TTGAGCGTAT TATTGAGCCT TATAAGCTTG GTATAGCGAT TGAAGATGTT AACTTCCTAC CGGCTCGTCC GCCGGAAGAG GTTAAAGATG CTTTCGATGA CGCTATCTCT GCTCAAGAAG ATGAACAGCG CTTTATTCGT GAAGCGGAAG CATACGCCAG AGCCATTGAA CCAAAAGCTC GTGGTCAAGT TCAGCGTATG GAGCAACAAG CTAACGCTTA TAAAGAGCGT GAAATCCTAG AGGCTAGAGG TAAGGTTGCT CGCTTTGAGC TTTTACTTCC TCAATATAAG GCTGCACCAG AAGTGACACG TGAGCGTTTG TATCTAGATG CAATGCAAAC GGTTATGTCT GGAACAAGTA AAGTGCTTGT AGACTCTAAG AGTAGTAATA ACATGATGTA TTTACCTCTG GATAAACTGA TGCAAAAGAA TCAGTCTGGT GCTAAGCCTC AAAAAGTGAA TTCAGCTGCT TCGCTTAATT CATCGAGCAG TACTATGGGC CAGAACAGCA TGCCAATTGA CTCACGCCCA TCACGCGGCG AACGTCAGGG GAGAAACTAA
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Protein sequence | MAWNEPGNKG KDPWGNKNGN DKGPPDLDEV FRNISKRFGG GKGNGSGSSF SSFSLIIVLG IAIVVWGLSG FYTVKEAEKG VALRFGQYVG EVEPGLQWKA TFIDEVFPVN VNTVRSIPAS GSMLTADENV VLVELDVQYR VVDAYRFLFS AVDANASLRE ATDSALRYVV GHNKMDDILT TGRDQIRRDT WAEVERIIEP YKLGIAIEDV NFLPARPPEE VKDAFDDAIS AQEDEQRFIR EAEAYARAIE PKARGQVQRM EQQANAYKER EILEARGKVA RFELLLPQYK AAPEVTRERL YLDAMQTVMS GTSKVLVDSK SSNNMMYLPL DKLMQKNQSG AKPQKVNSAA SLNSSSSTMG QNSMPIDSRP SRGERQGRN
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