Gene Swoo_4166 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4166 
Symbol 
ID6118517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5068015 
End bp5068605 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID641635728 
Productubiquinol-cytochrome c reductase, iron-sulfur subunit 
Protein accessionYP_001762517 
Protein GI170728491 
COG category[C] Energy production and conversion 
COG ID[COG0723] Rieske Fe-S protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000262583 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTTC TGACCGCAGC AACCGCCGTA 
GTAGGTGGTG CAGGTGCCGT CGCTGTAGCG GTTCCTTTTA TAAAGTCATG GAATCCGAGT
GCCAAAGCGA AAGCTGCAGG TGCGCCGGTT GAAGTAAACA TAAGTAAAGT AGAGCCGGGT
CAATTGATCC GTGTTGAGTG GCGTGGAAAG CCTGTATGGG TTGTACGCCG TACTGAGGAG
ATTCTTGAGA ATCTTGCAAC TCTTGATGAT CAACTTCGTG ATCCTGCATC AGTTGAAGAA
CAGCAGCCTG CTTACGCGCA GAATGCTGGA CGTTCAATCA ACCCTGAGTT CTTTATCGCA
GTGGGCCTAT GTACTCACTT AGGTTGTTCT CCTACCTACT TACCAGATAC ATTTGGTGAG
CAGGTTGAAG GCGTGCCTTC TGGTTTCTTC TGTCCATGTC ATGGTTCTAA GTTTGATATG
GCTGGTCGTG TATTCCAAGG TGTACCCGCT CCGTTGAACT TAGTAGTTCC ACCTCATCAG
TATATCGACG ATAACAATGT CATCATCGGT GTAGACCAGG GGGATGCGTA A
 
Protein sequence
MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG 
QLIRVEWRGK PVWVVRRTEE ILENLATLDD QLRDPASVEE QQPAYAQNAG RSINPEFFIA
VGLCTHLGCS PTYLPDTFGE QVEGVPSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPPHQ
YIDDNNVIIG VDQGDA