Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4166 |
Symbol | |
ID | 6118517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 5068015 |
End bp | 5068605 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641635728 |
Product | ubiquinol-cytochrome c reductase, iron-sulfur subunit |
Protein accession | YP_001762517 |
Protein GI | 170728491 |
COG category | [C] Energy production and conversion |
COG ID | [COG0723] Rieske Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000262583 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTTC TGACCGCAGC AACCGCCGTA GTAGGTGGTG CAGGTGCCGT CGCTGTAGCG GTTCCTTTTA TAAAGTCATG GAATCCGAGT GCCAAAGCGA AAGCTGCAGG TGCGCCGGTT GAAGTAAACA TAAGTAAAGT AGAGCCGGGT CAATTGATCC GTGTTGAGTG GCGTGGAAAG CCTGTATGGG TTGTACGCCG TACTGAGGAG ATTCTTGAGA ATCTTGCAAC TCTTGATGAT CAACTTCGTG ATCCTGCATC AGTTGAAGAA CAGCAGCCTG CTTACGCGCA GAATGCTGGA CGTTCAATCA ACCCTGAGTT CTTTATCGCA GTGGGCCTAT GTACTCACTT AGGTTGTTCT CCTACCTACT TACCAGATAC ATTTGGTGAG CAGGTTGAAG GCGTGCCTTC TGGTTTCTTC TGTCCATGTC ATGGTTCTAA GTTTGATATG GCTGGTCGTG TATTCCAAGG TGTACCCGCT CCGTTGAACT TAGTAGTTCC ACCTCATCAG TATATCGACG ATAACAATGT CATCATCGGT GTAGACCAGG GGGATGCGTA A
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Protein sequence | MSNAPVDTGR RRFLTAATAV VGGAGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG QLIRVEWRGK PVWVVRRTEE ILENLATLDD QLRDPASVEE QQPAYAQNAG RSINPEFFIA VGLCTHLGCS PTYLPDTFGE QVEGVPSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPPHQ YIDDNNVIIG VDQGDA
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