| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4152 |
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| Symbol | |
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| ID | 6118503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5052474 |
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| End bp | 5053502 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641635714 |
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| Product | porin |
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| Protein accession | YP_001762503 |
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| Protein GI | 170728477 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0544389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.155829 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAGA CATTAATCTC TACAACACTT GCCTCAATGT TCACATTAAC CTCATTCGGT
GCGCTAGCCG ATGGACCTAA CTTCTATGGT CGACTAGACC TTGCAGTGAC AAACTCAGAT
ACTGGCGCGA CAACGCAAGA GAAGAAAGAT GGCACTGTAA TTGAAAACAA CTTCTCCCAT
ATCGGTGTAA AAGGCAGTGA AACCTTAACT AAGGGTTTCG ATGTTATCTA CCAGATGGAG
TTTCAAGTAG AAAATACCTC AAGCAATAAA GATGTTTTCA AGGCTAGAAA TACCTACCTA
GGCCTGAAAA CAGTAGCGGG AACGTTACTT GTTGGTCGTA ACGATACGGT ATTTAAACAA
TCTGAAGGTG GTATCGATCT ATTTGGTAAC TCAAATGCTG ATATCGATCG CTTAGTTGGT
GGGCAAACTC GCTCTGCTGA TGGGATATGG TACTACTCGC CAAAAATTGC CAATGCAATA
TCCATTAATG CGACATACCT GATGGAGGAC AACCATCGTG ACGCCAATGG TAATGTTATT
GACGAAACTC AATACGCAAT AAGTGCCATT ATGGGTGATA AGAAGCTCAA GAACCAAAAT
TACTATCTGG CAGCCGCATA CAATACTATC GGTGGAATAG ATGCGTATCG GGGTGTTGCT
CAAGTCAAAC TTGGTGATTT CAAAATCGGT GGTCTATTCC AGAATACTGA AAGCCAAACT
GACTCAACTC AAGAAGGTAA CTCTTACTTC GTAAACGTGG CATACAACCT AAACGGCATC
AATCTTAAAG CTGAATACGG TAAGGATGAG GCCGGTTTCG GTAAATACTA CAAGAACATC
ACAGCCGACG TCAGGGGAAC TGAAATCGAT GTACAGGTTA TCACCCTTGG TGCTGATTAT
AAGCTCACTA AATCGACACT GATTTATGGC CACTATGCCA TGTATGAGGG TGACCATAAT
ACATTAGCGG GTAAAGTGAG CTTAGAAGAC GATAACATCT TCACCATAGG TGCACGTTAC
AACTTCTGA
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| Protein sequence | MNKTLISTTL ASMFTLTSFG ALADGPNFYG RLDLAVTNSD TGATTQEKKD GTVIENNFSH
IGVKGSETLT KGFDVIYQME FQVENTSSNK DVFKARNTYL GLKTVAGTLL VGRNDTVFKQ
SEGGIDLFGN SNADIDRLVG GQTRSADGIW YYSPKIANAI SINATYLMED NHRDANGNVI
DETQYAISAI MGDKKLKNQN YYLAAAYNTI GGIDAYRGVA QVKLGDFKIG GLFQNTESQT
DSTQEGNSYF VNVAYNLNGI NLKAEYGKDE AGFGKYYKNI TADVRGTEID VQVITLGADY
KLTKSTLIYG HYAMYEGDHN TLAGKVSLED DNIFTIGARY NF
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