| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4151 |
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| Symbol | |
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| ID | 6118502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5051023 |
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| End bp | 5052069 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635713 |
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| Product | porin |
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| Protein accession | YP_001762502 |
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| Protein GI | 170728476 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00169518 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.241214 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CACTAATCTC TGCATCAGTA GCATCTGTAC TTACACTGGC TTCATTCGGC
GCGCTAGCCG ATGGTCCTAA CTTCTATGGT CGTCTAGATC TTTCTGTGAC TAACTCTGAT
AAGAGCAGCA CACTTCAAAG TGGTACTAAC GGTGCAGAAG TAGGCGAAAG CGGTACATAC
CTAGAAAACA ACTTCTCACA CGTGGGTGTT AAGGGCAGCG AAAGCCTAAC TAGCAACATC
GACGTGATCT ACCAGATGGA GTTCCAAGTC GAGAACACTT CTGGCTCTGG TGACGTATTT
AAGGCTCGTA ACACTTTCCT AGGTCTTAAA TCTACAGCAG GTACCGTACT TGTTGGTCGT
AACGATACAG TATTTAAGCA AGCTGAAGGT GGCGTAGATA TTTTCGGTAA CACTAACGCC
GATATCGATC GTCTAATTGG TGGCCAAACA CGTTCTTCTG ACGGTATCTG GTACTACTCT
CCAAAGATCG CTGATTTAGT GACATTAAAC GCAACTTACC TGATGGAAGA TAACCAGACG
GATAAAGCGG GTAACCGAAT TGACGAAAAC CAATATGCAC TTAGTGCAAC TATCGGTGAC
AAGAAGCTTA AAGCACAAAA CTACTATGTA GCTGCCGCAT ACAACACTGT AGGCGGTATT
GATGCTTACC GTGGTGTTGC TCAAGTCAAA CTTGGTGATT TCAAAATCGG TGGTCTATTC
CAGAATACTG AAAGCCAAAC AGACTCAGCT CAGGAAGGTA ACTCTTACTT CGTAAACGTG
GCATACAACC TAAACGGCGT TAACCTAAAA GCTGAATACG GTAAAGATGA AGCTGGTTTC
GGTAAGTACT ACAAAAACAT CACTGATGTT GAAGGCACTG ACGTAAACGT TCAGTCAATC
ACTGTAGGTG CTGACTACAA GGTATCTAAA TCAACTATGG TTTACGGTCA CTACGCTATG
TATGAAGGCG ACCACAAAAC TGCAGCTGGT AAAGTTAACC TAGAAGATGA CAACGTATTC
ACAGTTGGTG TACGTTACAA CTTCTAA
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| Protein sequence | MKKTLISASV ASVLTLASFG ALADGPNFYG RLDLSVTNSD KSSTLQSGTN GAEVGESGTY
LENNFSHVGV KGSESLTSNI DVIYQMEFQV ENTSGSGDVF KARNTFLGLK STAGTVLVGR
NDTVFKQAEG GVDIFGNTNA DIDRLIGGQT RSSDGIWYYS PKIADLVTLN ATYLMEDNQT
DKAGNRIDEN QYALSATIGD KKLKAQNYYV AAAYNTVGGI DAYRGVAQVK LGDFKIGGLF
QNTESQTDSA QEGNSYFVNV AYNLNGVNLK AEYGKDEAGF GKYYKNITDV EGTDVNVQSI
TVGADYKVSK STMVYGHYAM YEGDHKTAAG KVNLEDDNVF TVGVRYNF
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