| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4150 |
|---|
| Symbol | |
|---|
| ID | 6118501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 5049486 |
|---|
| End bp | 5050301 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 641635712 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_001762501 |
|---|
| Protein GI | 170728475 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0818457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.243283 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGAAAAGA TGGTGCTTTC TGAAGCCTAT ATTAATCGTT TTGCTGGTAT TGGTCGTTTA
TATGGCCAAA AAGCCCTGAA TCGATTTGCT CAATCTCATG TTGCTGTGGT TGGCATAGGT
GGTGTGGGAA CTTGGGTTGC AGAGTCTTTA GCCAGAAGTG GCATCGGCGA GATCACCTTG
ATTGATCTCG ATGACATCTG TGTGACAAAT ACTAACCGTC AAATCCATGC TCTAAAAACG
ACAATAGGCG AGTCTAAAGT TGAGGTGATG GCTGAGCGTA TTTTACAGAT CAATCCAGAC
TGTAAGGTTA ATCAGGTTGA AGATTTTATT ACGCCGGAAA ATCTAGGTGA CTACTTTATT
GGTAGAAAAC AGGAAGGGGA CTTAGATTTT GTGGTCGATT GTATCGATGC TGTCAAACCT
AAGGCGGCTT TGATCGCTTG GTGTAAGCGG CAGAAACTGC CTATTGTTAC CGTTGGAGGA
GCTGGTGGGC AGGTTGACCC GACTCAAATA CAGATCACTG ATCTTGCTAA GACCTACCAA
GATCCTTTGT TGGCAAAAGT GCGTAATATA TTAAGACGTG AGTATAATTT TTCTAAAAAT
CTACAGCGAC GTTTTAGCAT TGAAGCGGTG TTTTCAACTG AGCAACTGGT TTACCCTCAG
GCGGATGGCA GTGTATGTAA CACTAAAGCC GATGCTGAAG GAAGTATGCG CATGGATTGT
GCTTCTGGTT TTGGTGCGGT GACCGTTGTT ACAGGTACTT TCGGTTTTAT TGCTGCTAGT
AGAGTACTGA TAAAATTAGC TAAAAAAGCT GACTGA
|
|---|
| Protein sequence | MEKMVLSEAY INRFAGIGRL YGQKALNRFA QSHVAVVGIG GVGTWVAESL ARSGIGEITL
IDLDDICVTN TNRQIHALKT TIGESKVEVM AERILQINPD CKVNQVEDFI TPENLGDYFI
GRKQEGDLDF VVDCIDAVKP KAALIAWCKR QKLPIVTVGG AGGQVDPTQI QITDLAKTYQ
DPLLAKVRNI LRREYNFSKN LQRRFSIEAV FSTEQLVYPQ ADGSVCNTKA DAEGSMRMDC
ASGFGAVTVV TGTFGFIAAS RVLIKLAKKA D
|
|---|
| |