| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4141 |
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| Symbol | |
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| ID | 6118491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5036119 |
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| End bp | 5037789 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635702 |
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| Product | hypothetical protein |
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| Protein accession | YP_001762492 |
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| Protein GI | 170728466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.5265 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCTC CAGAACTCAT TGAATTAAGT GTTGATAATA AATTTGCTGA ATTTAAGGTG
ATCCCCAATA CTCATGGCCC TATTTCAGAA AGTGCCGTTA TGGCTCTTTT AGCCTTACCT
GAATTCAGTC AGCTGCATCC ATTAGAGAAT ATTATTGAAA AAGCGATCAC TCAGGTTAAT
CAGCTATGCG AACAGGAAGA TGGCCAATTC GAGCAGTTTT TCAAGATAGC AGAACGTATC
GATGGGCAGA TAAACGTAAA AATTGCCGAA GATAAAATGT CGGCAAAAAT GGAGCTAACA
GCGCCTTGGG GTGGAGAGAA GGTCACTATT CAAGGGATCC TTCAAGCATT AAAGGCCAGC
AACGTCTGCA TGGGTTTGAG TAAAATAAAG ATACAAGCAT TACTCAAAGA GCTATCAAGA
AAGCAAGCTG GCGAAACCTG TGAATGTGTT ATTGCGACAG GAAAGCAGAG CATCAATGGA
GACAACGCCT CGATAGAGAG AAAGGTCCCT CTTGCCAGAG AAAGACTACT ACAACCGCAA
GAGAGAGAGG ATGGCACTGT CGATATGCAC AATTTAGGCT CTGTCATCAT GGTCGATCCC
CAAGATCTGC TTATTGTTAA ACACCCAGCG ACAGAGGGAA CAAGCGGTTA CAATATCCAT
GGAGAGATTT TAGAGCCTGT TCCTGGAAAA GATCTCCAGC TTATCCCTGG CAATGGAACT
GAACTTTCAA GCAGCAATCC CAACCATCTT ATCGCCAGTG TTTCTGGTCA GCCTGTTGAG
ACAAAAACAG GTATGCAAGT CGATGATGTG CTGAATATTA AGGATGTTGA TGTCGGCTAT
GGAAATGTTG ACTTTAAGGG CAGTATTCTC GTCACAGGCG ATGTCCATGA AGGCATGGTA
GTAAAAAGCA CTGGTGACAT TACCGTAATG GGTTTCGCTG ATTCAGCAAC ACTCATTGCT
GATGGAGATG TCATTGTCAG TAAAGGGATT ATAGGCAGAC AGCTCAAAGA GAAAGAGCTA
TCAACCAAAA TTAGAGCGAA AGGACAGATC TGCGCACAAT TCATTCAATA TTCAGATCTC
GAGGCTGAGG GAGAGATCTT AGTTACCAAA CAGCTACTCC ACAGCTATAC CAAGACTAAA
CAAACGCTCA CAGTCAGCGA TCCAAATGGG CGACGAGGCG ATCTGGTTGG CGGTATTGCT
AAGGCTGATA AATCGGTGAT TGCCGTGACC ATAGGTGCTA CAGCAGGAAC TAAAACTGAG
ATATTCTGCG CCATGAGACA AAACGAGCTT AAGGAGAGAT CAAAAGAGTT AGATCAGAGC
ATTAAAGCTA TGGTCGTGAC GAGCCTAGAT CTCGAAGCAA GGATGCGCAA ACTTCCACCA
AAGAGTGAAT GGCAAGGCGA TGAGATGATG GTTGAGCAGG TACAGATGAT GCTGGAAGAA
AAAGCAGAGC TTGCCACTCG CCGTGTGAGG GAAGAAGCAG AATTTGGGCA ACTACAAGGT
GAAATAGAGA ATTACTACCG TGAATGCCAT GTTGAAGCCC ATAAACATAT CTTTGCCAAC
GTAGAGCTGC ATATCGGACA AGCCTTTAAT CGTACCCAAC GTGAACACGG CACTTGCATG
GTTTTTAACC AAGGCAAAGA ACTCACATTT GATTACGAAA CCAAGCATTA A
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| Protein sequence | MLAPELIELS VDNKFAEFKV IPNTHGPISE SAVMALLALP EFSQLHPLEN IIEKAITQVN
QLCEQEDGQF EQFFKIAERI DGQINVKIAE DKMSAKMELT APWGGEKVTI QGILQALKAS
NVCMGLSKIK IQALLKELSR KQAGETCECV IATGKQSING DNASIERKVP LARERLLQPQ
EREDGTVDMH NLGSVIMVDP QDLLIVKHPA TEGTSGYNIH GEILEPVPGK DLQLIPGNGT
ELSSSNPNHL IASVSGQPVE TKTGMQVDDV LNIKDVDVGY GNVDFKGSIL VTGDVHEGMV
VKSTGDITVM GFADSATLIA DGDVIVSKGI IGRQLKEKEL STKIRAKGQI CAQFIQYSDL
EAEGEILVTK QLLHSYTKTK QTLTVSDPNG RRGDLVGGIA KADKSVIAVT IGATAGTKTE
IFCAMRQNEL KERSKELDQS IKAMVVTSLD LEARMRKLPP KSEWQGDEMM VEQVQMMLEE
KAELATRRVR EEAEFGQLQG EIENYYRECH VEAHKHIFAN VELHIGQAFN RTQREHGTCM
VFNQGKELTF DYETKH
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