| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4134 |
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| Symbol | |
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| ID | 6118484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5027080 |
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| End bp | 5027811 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635695 |
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| Product | 16S ribosomal RNA methyltransferase RsmE |
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| Protein accession | YP_001762485 |
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| Protein GI | 170728459 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0859841 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGAATCC CAAGAATATA TCAGGCATCG CCATTACAAA TAGGCAATCA AGTCGAGCTT
GATGATGAGC CAGCCTCTCA TATCGGCCGA GTACTACGTA TGAATGCGGG CGAGCAGATC
AGCTTGTTTA ATGGTGATGG CCATGAATAC CTGTCAGAGA TCATCTCTGC CAGTAAGAAA
AATGTCTCTG TTAAGGTCCT ATCTTCAACG CTTAATGAAA GCGAGTCACC ACTCCACCTT
CACTTAGGAC AGGTGATCTC TCGCGGAGAT CGCATGGATT TCACCATACA GAAATCTGTT
GAACTTGGTG TAAATACTAT TACGCCACTG TTTTCTGAAC GCTGTGGCGT GAAGCTCTCA
GGCGAACGTT TAGAGAAAAA AATACAGCAG TGGCAGAAAA TAGTAATAGG GGCTTGTGAG
CAGTCTGGTC GTAGTCAGGT ACCGGAAATA AGGCCGGCAA TGACAATTGA AGCCTGGAGC
GCCGAGCAAA CTGATGCAAC AAAATTGAAT CTACACCCAA GAGCCGCCCA CGGCATCGGT
GGTTTATCGC TAACATCGCC TAAAGTAAGG CTACTTATTG GTCCTGAAGG CGGACTATCT
GAAGCTGAGA TTATGATGAC AGAGCAGTAT CAGTTTACAG ATGTTCTGCT TGGCCCAAGA
GTATTAAGAA CAGAAACTGC AGCACTCACA GCCATTAGCG CCCTGCAATT AAGATTTGGA
GATTTGGGTT AA
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| Protein sequence | MRIPRIYQAS PLQIGNQVEL DDEPASHIGR VLRMNAGEQI SLFNGDGHEY LSEIISASKK
NVSVKVLSST LNESESPLHL HLGQVISRGD RMDFTIQKSV ELGVNTITPL FSERCGVKLS
GERLEKKIQQ WQKIVIGACE QSGRSQVPEI RPAMTIEAWS AEQTDATKLN LHPRAAHGIG
GLSLTSPKVR LLIGPEGGLS EAEIMMTEQY QFTDVLLGPR VLRTETAALT AISALQLRFG
DLG
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