| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4123 |
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| Symbol | |
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| ID | 6118473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5012046 |
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| End bp | 5016602 |
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| Gene Length | 4557 bp |
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| Protein Length | 1518 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635684 |
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| Product | carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001762474 |
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| Protein GI | 170728448 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0401136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000196181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCAGCA ACAATAAGCC CACAAACATG ACTCAAGCTC AATCAGCCGA TCCGCTTTTT
CTGAAAGCTG AGCACCTGTC ACAAGACTTT TCACTGTTTC CTGAGCACAG TAAACAGAGT
TTATCTGAAG AGATTAAAGG TCTCTTAGAT GACGAAGCTA TCCAGTCAAA TCTTAAAGAA
CTGGAGCAGC TAGATGTAGA TGGTTATGTC GCTCGCGTGA TCCAACCTAC ATTGGATAAG
AGCCGCCTTG GCGCTAAGCG CGTCATTGCT GACCTAAAAG GCAAGTTGAT TGCCGAAACC
CATATGGGTC CATTTTACAG TGCTGAAATT GAACTTAATT TCGGAACGCG TACCCGCCGC
TTAGGCTTTA TCGCCCAAGA GCGTACAACG GGTAATGGCG CTTGGTTGCC AGAGCACCAC
CTCGCAGCTT GTAAGGCTAT CCGTCAGTAT GCTGAATTGG CGATGCCAAT TATCTACCTT
ATCGACACCC CCGGTGCGGA TGCTGGTGAG ATTGCCAATA GCCAGAACCA AGCGCACAGC
ATCTCTAAAG CGATTGCTGA AAGTGCTAAC GTTGACGTAC CGACAGTCGG TATCGTGATT
GGTGCTGGTT ACTCAGGTGG CGCTATCCCA TTAGCAGCAG CTAACATTCT ACTTTCATTG
CGTGATGGTA TCTTCAACAC CATTCAGCCA CAGGGTTTGC AGAGCATTGC TCGTAAGTAC
AACCTCTCTT GGCAGGAGTG TGCAAAATCT GTTGGTGTAT CACCTGAAGA GCTATACACA
TCTGGTTGTA TCGACGGCAT CATCGATTTC TCTCCATCTG ATAAAGATGA GCGTCAACAT
AATCTACGTC GTGCAATCAT TAGCAGTGTT GAAGCTGTTG AGCAGGCTGC TATTCAGTTT
GTGCGTGAGT CTGACGACCT GCGTGAACAC TATGACCGCA GTCTAAGCCG CTTCCTAAGT
CCCTCTAAAA ACCTAGCGGC GCTAGAGGAT CATGCTGAGC TGGCTGTAGC GAATAACCCG
ACTATGCACC TTAACCTGTT TGGTAGTGCA TATCGTTACT TGCGTTACCT GACGCTACGT
AGCCGTATTC ACTCTATCTC TCAAGAACAG TATGGTCGTC TGTCTAAGGT CAGCGTACCT
GAAGGTGATC TGCTGGCTCG TATTCAGCAG GAGCAAGATC GTGTCTTTCA GTCTTGGTTA
TCAAGCCCAG ATAAACTGGT TTACGATGAA GAGCTAAATA AGCTGTGGGG CAACTTCACC
GCTAAGCGTG ATGAGGTTTC TACAGAGCGT AATATGCTAA CTCGTTTGAT TTTGGGTGAA
CCAAAAGAGA ACTACAAAAA AGCACGTAAG GCGCTGTTAT TTAACATCGG TTGGTCTTTA
TACCACCGCT GGAAAGGCAA CGCTGAGAAC AACTTTAAAG GGCTTATTCA GTACCTTGAA
ACCTTGCCAC CAGAAGTCAC TCAAGCCGAT TGGCCTGAGC TGAACCAGCT GACTGTACTT
GATGTGGTTA TTCACGATGA GCTTCGTGAA GACTTTATCT GGCAGTGTTA CAACATCCTT
ATCTTTAACG CACTTTATGA CAATGTTGTG GGTAACCTAG CGTCAATCGC TAAGGAAGCA
ATGATGTCTA AGAGCTTGTC TCGTGCATCT GTCGATAACT TGCTTCATGA CTCTATTGAC
CGTGCGATTT CGACTCAAGA TACGGCTAAC GATAAAGGTA AGTTCTACAA GTGGCTGAAG
TTCTTTATGT CTCAGTCAAA CCGTGCTGAG CTGCTAACTA AAACTGAGCA GTGGAAGAGT
GTTGGTTTCC CTCAGTTAAA TGACAGTCTG TTCGTTATCT TGACCTACTT CTTTGAGCGC
TTACTGCCTG AGTATTTCGA CAGTGAAAGC GAAGACAATG AGTACACAGG TGCAATCAAC
CCTGTGCGTA TCGGTCGTCG TAAAGATTTC TGGAACCGTC TCACCATGGG CTATCAGGAT
CTGTTGATCC AGAAAGTGCT ACGTGATGAG AAGCGCAGCG GTAAGATGAG TTGGGAAAAT
ATCACCAACA AGTTCTTCAC CGACTTCGAA GAGTTTAATG GCGACAAGAT GTCTGCCAAC
TTGCTTAACT TCCCAGGTTT TAGACTCTCT ATCGAAGATG CACTCGATAA AGGTATCCGT
CCTTGTGGTC TTATCACAGG TATGGCTGAT TTTGAGCAAG ATGGTCAGCA GATGAAAGTC
GGTGTTGCGG TATCAAACAC TGCATTCCAG GCGGGTGCAT TTGATATGGC CAGTGCCGAG
AAGTTCTCTG CACTGCTAAT TGAGTGTGCT AAGCGTAAGC TACCTGTTAT CTGTTTTATT
AGCTCTGGCG GTATGCAGAC GAAAGAGGGC GCTGCGGCAC TGTTCTCTAT GGCTGTGGTT
AACGATCGTA TCACACGCTT TATTCGTGAC AATGAGCTTC CAGTTCTGAT GTTTGGTTAT
GGTGACTGTA CTGGTGGTGC TCAGGCGAGT TTTGTGACTC ACCCACTTGT GCAAACTTAC
TACCTGTCTG GTACTAACAT GCCGTTTGCT GGTCAAATGG TTGTTCCTGC GTACCTGCCA
TCGACAGCGA CTCTGTCTAA CTATTTGTCA AAAGTGCCAG GTGCGATGAA TGCGCTGGTT
ACTAACCCGT TTAGTGACAC CATTGATGAG CAGCTAGCGG GAATTGATCC GCTTATGCCT
AAACCAACGG CTAAGATTGA AGAGGTGATC ACCAAAGCGC TATCAACCTT AGTGCCTGAG
ATGTTGGTGG CCGATGAAGA GATTGTCCAA GACGATCCTC GTCAGCTAAT GAAGCCTATC
AATAAGGTTC TGGTTCATGC TCGTGGTTGT ACTGCGGTTA AACTTATCCG TAAGGCACAC
GACAACGACA TCAATGTCGT ACTGGTTGCA TCGGATCCTG ATATGACCTC GGTACCTGCC
GATATGCTTA AAGATCACGA TAAGCTTGTT TGTATCGGTG GTAACACTTC AGATGAGAGT
TACCTAAACG CATACTCAGT ACTTAAAGTT GCTGAATATG AGAATGTAGA TGCACTTCAC
CCAGGTATTG GATTCCTCTC TGAGAGCCCG CAGTTTGCTG CCTTGTGTGT TAACAATGGT
GTTAACTTCG TTGGACCAAG TGTTCACTCG ATGACGACCA TGGGTAACAA ATCGAACGCA
ATTAAGACCT CTCAAGCGAA TGGTGTTCCA GTTGTTCCTG GTAGTCACGG TATCCTGACT
AATGCTGAGC AAGCGGTAAA TGTGGCCAAT GAGATTGGTT ATCCTGTACT GCTTAAAGCG
GTACAAGGTG GTGGCGGTAA AGGTATTCAG GTTGTTGAAC GCCCAGGTGA CATGATAAGC
CTGTTCCAAC AGACCTCTAC CGAAGCTGCA GCAGCATTTG GTAATGGTGA TCTCTACCTT
GAAAAATATG TCACTTCACT GCGTCACATC GAAGTTCAGT TGCTTCGTGA CCAGTTTGGT
AACACTAAGG TATTGGGTAT TCGTGACTGT TCAGTTCAGC GTAATAACCA GAAGGTTGTT
GAAGAGTCAG GCTCGACTAT GTTGCCTGAA GAGCTGAAAG AGAAGGTACT TGAATATACT
CGTGCACTAG GTAACGCGAC TGATTACATG GGTGCTGGTA CTGTTGAATT CATCTATAAC
TTAGACGCGA ATGAAGTCTA CTTTATGGAG ATGAACACTC GACTACAGGT TGAACATCCA
GTAACTGAAG CGACCTCTTG CATCGACATC GTAAGTGCTG GTTTTGATAT CGCTGCCGGT
CGTTCAATTG AAGACTTAGA GCCACAAGAT AAAGGCTATG CGATTGAAGT GCGTGTGACG
GCTGAGAAAG CGGCACTGGA TAGCAATGGT ATTTTACAGC TGCTACCACA TCCTGGTTTG
ATCACTGAGT ACCAGATGCC AGAGCGTGAT GATATCGAGA TCATCTCTAT TGCTGGCGAA
GGTAAAGAGG TATCACCATA CTACGATAGC TTAATCGCGC AGATAATCTG TCGTGGTGAA
AGCCGTGAAG ATGTGATCAC TAAGCTGCAT GACTACTTAG CCAACAGTGT GGTTATTAAG
GGCATTGCAA CCAATATCCC ACTACTGACC CGTATCTTAA AAGACGGTAC ATTCAACGAA
GGTGTGTATG ACACTAACTA CCTACCTCGT TTGATGGCTG AGCTGGATAT TCCTGAACTG
ATTGCAGAGA TGGAAGCGGC GGCAGAAACT GTGGGTGTTG ATACTGCATC ACTGCGTGTT
GGTGAGAGTA ATGAGCTTAA AGTGATGGCA CAAGGTGCAG GTATCTTCTA CACCTCTCCT
GCGCCTGGTG AAGCTGATTT TGTTAAAGAG GGTGACATTG TCACTGCGGA TCAGACTTTA
GCGCTGACCG AAGCGATGAA GATGTTCTCT CAATTGAACC TAGCTGGTTA TAACCGTAAA
GATGCTGTGC TTTATCCTGA AGATAAGAAA TATCGCATCG AACGAGTGCT AAACAGCAAT
GGTCAGCAAG TCTCACAAGG TGATCTGTTG TTTGTTGTAT CGCCTGTTGA TGCTTAA
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| Protein sequence | MTSNNKPTNM TQAQSADPLF LKAEHLSQDF SLFPEHSKQS LSEEIKGLLD DEAIQSNLKE
LEQLDVDGYV ARVIQPTLDK SRLGAKRVIA DLKGKLIAET HMGPFYSAEI ELNFGTRTRR
LGFIAQERTT GNGAWLPEHH LAACKAIRQY AELAMPIIYL IDTPGADAGE IANSQNQAHS
ISKAIAESAN VDVPTVGIVI GAGYSGGAIP LAAANILLSL RDGIFNTIQP QGLQSIARKY
NLSWQECAKS VGVSPEELYT SGCIDGIIDF SPSDKDERQH NLRRAIISSV EAVEQAAIQF
VRESDDLREH YDRSLSRFLS PSKNLAALED HAELAVANNP TMHLNLFGSA YRYLRYLTLR
SRIHSISQEQ YGRLSKVSVP EGDLLARIQQ EQDRVFQSWL SSPDKLVYDE ELNKLWGNFT
AKRDEVSTER NMLTRLILGE PKENYKKARK ALLFNIGWSL YHRWKGNAEN NFKGLIQYLE
TLPPEVTQAD WPELNQLTVL DVVIHDELRE DFIWQCYNIL IFNALYDNVV GNLASIAKEA
MMSKSLSRAS VDNLLHDSID RAISTQDTAN DKGKFYKWLK FFMSQSNRAE LLTKTEQWKS
VGFPQLNDSL FVILTYFFER LLPEYFDSES EDNEYTGAIN PVRIGRRKDF WNRLTMGYQD
LLIQKVLRDE KRSGKMSWEN ITNKFFTDFE EFNGDKMSAN LLNFPGFRLS IEDALDKGIR
PCGLITGMAD FEQDGQQMKV GVAVSNTAFQ AGAFDMASAE KFSALLIECA KRKLPVICFI
SSGGMQTKEG AAALFSMAVV NDRITRFIRD NELPVLMFGY GDCTGGAQAS FVTHPLVQTY
YLSGTNMPFA GQMVVPAYLP STATLSNYLS KVPGAMNALV TNPFSDTIDE QLAGIDPLMP
KPTAKIEEVI TKALSTLVPE MLVADEEIVQ DDPRQLMKPI NKVLVHARGC TAVKLIRKAH
DNDINVVLVA SDPDMTSVPA DMLKDHDKLV CIGGNTSDES YLNAYSVLKV AEYENVDALH
PGIGFLSESP QFAALCVNNG VNFVGPSVHS MTTMGNKSNA IKTSQANGVP VVPGSHGILT
NAEQAVNVAN EIGYPVLLKA VQGGGGKGIQ VVERPGDMIS LFQQTSTEAA AAFGNGDLYL
EKYVTSLRHI EVQLLRDQFG NTKVLGIRDC SVQRNNQKVV EESGSTMLPE ELKEKVLEYT
RALGNATDYM GAGTVEFIYN LDANEVYFME MNTRLQVEHP VTEATSCIDI VSAGFDIAAG
RSIEDLEPQD KGYAIEVRVT AEKAALDSNG ILQLLPHPGL ITEYQMPERD DIEIISIAGE
GKEVSPYYDS LIAQIICRGE SREDVITKLH DYLANSVVIK GIATNIPLLT RILKDGTFNE
GVYDTNYLPR LMAELDIPEL IAEMEAAAET VGVDTASLRV GESNELKVMA QGAGIFYTSP
APGEADFVKE GDIVTADQTL ALTEAMKMFS QLNLAGYNRK DAVLYPEDKK YRIERVLNSN
GQQVSQGDLL FVVSPVDA
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