Gene Swoo_4087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4087 
Symbol 
ID6118437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4959022 
End bp4959669 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content50% 
IMG OID641635648 
Productphosphoglycerate mutase 
Protein accessionYP_001762438 
Protein GI170728412 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA GTGAAACGCA AGATTGGAGC AATGGTAAAA CGACCAGCCT TTACCTGATG 
CGTCATGGTG AATGCGAAGG TGGTGATATA TTACGAGGCC AAACCGATGT GGCCTTGAGT
CAACTTGGCA AGGAGCAGAT GCAGCAAGAA TTAGCTGGGT TAGATATTGA GTTTGAGCAG
GTGATCTGCT CTCCACTGCG CCGCTGTAGC GAATTTGCTT TAAGCCTCTA CCTTGAAAAG
GGGATCCCGC TGAAGATGGA GGATGGGCTC AAAGAGATAG ACTTTGGTGA CTGGGACGGC
GAGACACTAG AAACACTGTT TCAGCAGAGC TCAAGTGTGT TGGATATGTA CTGGAAGAAC
CCTTGGGCAT TTACGCCACC TAATGGCGAG ACGATGCAGG AGTTTGAGGC CAGAGTAAAT
CAGGGGTGGG AGAGGATAAT AAGCCAGTAC AGCGGGCAGA CCTTGCTACT GGTGACCCAT
GGTGGTGTGA TCCGCCATCT AATGTCTAAG GCATTAGGTG CGACAGGAGT CGCAGGCTTT
TACACCCAGC TTGCACTGGA TTATGCCTGC GTGGTGAAGA TCACCGTTTA CAGCTCAGCT
CAAGGGGAGC TATTCACTAA ACTGCATTGG GGTGCTAATG GCAATTGA
 
Protein sequence
MEESETQDWS NGKTTSLYLM RHGECEGGDI LRGQTDVALS QLGKEQMQQE LAGLDIEFEQ 
VICSPLRRCS EFALSLYLEK GIPLKMEDGL KEIDFGDWDG ETLETLFQQS SSVLDMYWKN
PWAFTPPNGE TMQEFEARVN QGWERIISQY SGQTLLLVTH GGVIRHLMSK ALGATGVAGF
YTQLALDYAC VVKITVYSSA QGELFTKLHW GANGN