Gene Swoo_4062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4062 
Symbol 
ID6118412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4933081 
End bp4933998 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content45% 
IMG OID641635623 
Producthypothetical protein 
Protein accessionYP_001762413 
Protein GI170728387 
COG category[S] Function unknown 
COG ID[COG3220] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGAAA CGGCACTGAC ACAAGATTTT CTCGGATTTG GATTGGGGTT AAGAACCAAT 
CACTTTGACC ATGTTCTGAC AAATCGCCCC GATATAGACT GGTTTGAAGT GTTATCGGAA
AACTATATGG TCGCTGGCGG CAAGCCAAGA TATTATCTTG AAGCCATAGC CGAACAATAT
CCGATAGTGA TGCATGGTGT CTCTATGTCG ATAGGCAGCA CAGACCCTCT GGATAGGGAG
TATTTAACCG CACTTAAAAA GCTCGCTAAT GATGTTCAGC CTCAATGGAT CTCAGATCAT
ATCTGCTGGA CCTCAATTCA TGGGGTGAAT AGCCATGATC TTCTGCCCCT TCCCTATACC
GAAGAGACCA TCAAGCATGT GGCTGAGCGT GTACGTCAAG TACAGGATTT TTTAGGCAGA
CGGATTTTGT TAGAGAACGT CTCCAGCTAC CTCTCTTATC AAGACTCAAC CATGGACGAG
TGGGCGTTTC TCAATGCGGT CGCTGAGCAA GCCGACTGCC TCATACTTTT AGATATCAAT
AACATTTATG TCAGTGCTAG AAATCATAAT TTCGACCCTG TCACTTATCT CAACAAGATC
GACCCTAAAC GGGTACAACA GTTCCACCTT GCAGGCCACT CTGACTATGG AGATTATGTC
GTCGATACCC ATGATCACGA CGTGCCTAAT AGTGTATGGG AACTTTACCG TATTGCCCTT
GAGCGTTTCG GTGCTATCAG TACTATGATA GAGCGAGATG GCAATATTCC TGAATTCCCA
GCGTTGGAGC AGGAGCTACA AATAGCCAGA GATATTGCAG AAAAGACATT GCCTGAACTC
GCTTCTCAAT TAGCGAGTAT CAATGAACAA GCTCAAAAAC AGAGCTTAAA AACAGGAATG
TTTGATGACC AGTCTTAA
 
Protein sequence
MTETALTQDF LGFGLGLRTN HFDHVLTNRP DIDWFEVLSE NYMVAGGKPR YYLEAIAEQY 
PIVMHGVSMS IGSTDPLDRE YLTALKKLAN DVQPQWISDH ICWTSIHGVN SHDLLPLPYT
EETIKHVAER VRQVQDFLGR RILLENVSSY LSYQDSTMDE WAFLNAVAEQ ADCLILLDIN
NIYVSARNHN FDPVTYLNKI DPKRVQQFHL AGHSDYGDYV VDTHDHDVPN SVWELYRIAL
ERFGAISTMI ERDGNIPEFP ALEQELQIAR DIAEKTLPEL ASQLASINEQ AQKQSLKTGM
FDDQS