| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4046 |
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| Symbol | |
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| ID | 6118396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4922491 |
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| End bp | 4923360 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641635607 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001762397 |
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| Protein GI | 170728371 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins
[COG3449] DNA gyrase inhibitor |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCTA ATGGAGAGCT AGATAATTAC ATCAGAGTGA TGGACAGGGT TTGTGATTAT
ATCTATGCAA ATCTAGACGA GGAGCTAACA GTCGATCACC TGAGTGATTT TGCAGGTTTT
TCTAAGTTTC ATTTTCACCG TCAGTTTTCA GATTACCTCG GTATAGGCAT AGCTAAATAT
ATCCAGCTTT TACGATTAAA GAGGGCATCA TACCGGCTCT ATTTCGACCG TGAGGCCAAG
ATTATCGATA TCGCCTTAGA CGCTAAGTTT GATTACCCAG AGTCTTTTGC TCGGGCATTT
AAGAAGGCGT TTGACCAATC TCCTACTGAA TTTCGCAGCC AGCCAAAATG GCTGGAATGG
AATGAGAAAT ATCACTTTGG AGTAAAAAAG ATGGGTAAAG ATCAAAAGGT TGAATTGGTC
AATTTTGCAG AGACTAGAAT TGCCGTTTTT GAGCACCGTG GTGCACCTGA GCTGGTCAAT
GAGTCTGCGG CAAAGTTTAT CGCTTGGCGT AAACAGACAG GTTTATCACC AGTGAGCAAA
AGCCAAACAT TCGGCATGAT CTATGAAGAT CCTAAATCTG TACCGGCTGA GGATTTTAGG
TTTGATATCT GTGGCTCGGT ACTGCATGAA GTACCAGATA ACAGCCATGG TGTGCTTAAT
AAAGTGATAC CTCAAGGGCG TTGCGCTGTG ATCCGTCATC ATGGTTCCCA TGATGCTCTG
GATGCCAAGG TGCATTACCT TTATGGTCAA TGGTTACCCA AAAGTGGTGA GTCTCTTCGC
GACTTCCCCT GTTTCTTTCA TTATCAGAAC TTCTTCCCAG AAGTGGCTGA GCATGAACTC
ATCACGGATA TCTATCTGCC CCTAAATTAA
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| Protein sequence | MQANGELDNY IRVMDRVCDY IYANLDEELT VDHLSDFAGF SKFHFHRQFS DYLGIGIAKY
IQLLRLKRAS YRLYFDREAK IIDIALDAKF DYPESFARAF KKAFDQSPTE FRSQPKWLEW
NEKYHFGVKK MGKDQKVELV NFAETRIAVF EHRGAPELVN ESAAKFIAWR KQTGLSPVSK
SQTFGMIYED PKSVPAEDFR FDICGSVLHE VPDNSHGVLN KVIPQGRCAV IRHHGSHDAL
DAKVHYLYGQ WLPKSGESLR DFPCFFHYQN FFPEVAEHEL ITDIYLPLN
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