| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4030 |
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| Symbol | |
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| ID | 6118380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4902205 |
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| End bp | 4904403 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635591 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001762381 |
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| Protein GI | 170728355 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.667101 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATAT TTTCAAGAGT TATAACAGCT GGAGCATGCG TGACAGCGAC AATAAGTAAC
CTGCTTTTGG TGAGTTTTTC ACTGCAAGCT GAAGAGAGCG AACTGCAAGA GAGTGAGATG
GAGGTGATTG AGGTCACCTC TAGGCAGCGT AAAGAGAATA TACAAGAAGT ACCAATGGCT
ATCACTGTAT TTGGCGAGCA GGATATTGAA GATCTAGGGA TTGAGCGTGC AGCAGATTTT
ATCTCGCTGA CGCCGAACAT GACCATGGTT GAAGCTCAGA ATGCTGGAAC TAGTTTTATC
ACCATAAGAG GACTGACTCA GGTTCGAAAT GGTGAGTCAC CTGTTGCCAT ATCGGTTGAT
GGGGTATTGC AAATCAGCCC TAATCAATTC AATCAGGATC TTTATGACAT AGCGCAAATA
GAGATCTTAA AGGGGCCGCA AGGTGCACTT TATGGGCGAA ATGCCATCGG TGGTGCGATC
AATATCACCA CGAAAGCGCC AACGGATGAG TTAACGGGTT ATGCTGAACT AGATTTAGGT
AATGGGGGGT TGAAAGCCTT GTCTGGCGCG ATAAGTGGGC CTATGACAGA TACTTTAAAC
TATCGCATAA CGGCTTCCTA TAAAGATTTT GATGGTTTGA TTGATAATGT TTACCTGAAT
GAAAAGGTCG ATTTTCAACA AGATAAAAAC ATTCGAGGTC GATTTATCTG GCAGCCAAAT
GATGATTTTT CTGCCGACCT AAGAATTGCG AGGGGAGAGA CTGAGGGAGG GGCGGTTAAC
TATATCTATC AGCCACTCTT TGGAATTAAT GATGCTAATG ATGCCAGTCT AAATATTGAG
GCGAATAATC TCGGTGAAAA TGATCGTCAA ATCACTTCGG CTTCTTTAAA GCTTGATTGG
AATATCTCAG ATGTGACGGC AGGTCTTATC CTCTCAGCTG ATGAGCTGAC TGAGTTTCTA
TCCGGTGACC AGTTCCCCTA TAGCCGTAAT ACTTCGGCCA CATCACCTTT TGGTCCAAAT
GTATTTGATG GGGTACAAAC GCAATATTTA GATACTAGCT CTCAAAGTGC TGAGTTGAGA
TTTACCTCTG ATGATGACAG TGACCTACGT TGGATTGCGG GTCTCTATTA TCTGCAAACT
GATCGCTTTA TTTCATCTTT TAACGGTTTA GATCTGGGCA AAGGGATCCC AAGAGTTGAA
AAGACACCAC CGCTGAATGA TGACATTAGT CCAGCGACCG TTTTTTTAGC TGACAGTAAC
GATAACCAAT CCTATGCGGT ATTTGCACAA CTCAATTATG ACCTGACAGA TACTCAAGAA
TTAAGCATAT CGGGGCGTTA TGATTCGGAT ACTCGAGAGC AAACCAATCG TGCTCCAGTT
AGTTTTGACT CGAACTCAGG TGAGGTTCGC GAAGAGACCT TCAGCAAGTT CCAACCTAAA
GTCTCCTACG TCTACACAGG TTTACCTAAC TTAAGCCTCT ATGCCAACTT CTCTGAAGGG
TTCAGAAGTG GTGGCTTTAA CCAAAGTGGT GTGGGCGACT TAGCTGCATC GGCTGGGTTA
TCTGGAGTAA GCGATCTCTA TAAAGCGGAG GAGTCCAGTA ACTTTGAGCT AGGCATTAAG
GGGCTCTACC CAGATATATC TACCCGTTTT AATGCATCAC TTTTTAATAC CAGTATCGAT
AACCAACACT ATTTTGTTTT TGTTGGTTCA TTGGGGGCAC AGGTATTGAC CAATATCGAT
GAGGTATCCC TGATTGGTGG TGAATTTGAT TTTAAGACCG AGCTACATGA CAACATCGAC
CTTTATGGTT CATTTGGTAT TACAGATAGT GAAATTAAAG CTTACAGCTT AAATCCTGCG
GATGTGGGAA ATAAGGCCCC TTACGTACCT GAGTATACGG TTAATTTAGG TGCTCAGTTC
CATGCTGAAC TCTTTAGTGG TTGGTTATCG ACTTTAACAC TAGATTGGGA GCAAAGAGGT
GAGCAGTATT GGGATCCCTC TAATACCAGT GCCCGTGATG CCATTAATTT AGTCAATGCA
CGGTTGGGCT TTAACCGTGA TGAAGGTGAT TGGAGTGTGA ACCTTTGGGC GAAAAACCTA
GGTAACGAAG AGTACCTTGC TGAATGGGTA TTAGGTGGCT TTGCTCACCC AGCTCAAGAG
CGAACCTTTG GTATCGAGCT GCGCTGGAAT ATGGAGTAA
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| Protein sequence | MSIFSRVITA GACVTATISN LLLVSFSLQA EESELQESEM EVIEVTSRQR KENIQEVPMA
ITVFGEQDIE DLGIERAADF ISLTPNMTMV EAQNAGTSFI TIRGLTQVRN GESPVAISVD
GVLQISPNQF NQDLYDIAQI EILKGPQGAL YGRNAIGGAI NITTKAPTDE LTGYAELDLG
NGGLKALSGA ISGPMTDTLN YRITASYKDF DGLIDNVYLN EKVDFQQDKN IRGRFIWQPN
DDFSADLRIA RGETEGGAVN YIYQPLFGIN DANDASLNIE ANNLGENDRQ ITSASLKLDW
NISDVTAGLI LSADELTEFL SGDQFPYSRN TSATSPFGPN VFDGVQTQYL DTSSQSAELR
FTSDDDSDLR WIAGLYYLQT DRFISSFNGL DLGKGIPRVE KTPPLNDDIS PATVFLADSN
DNQSYAVFAQ LNYDLTDTQE LSISGRYDSD TREQTNRAPV SFDSNSGEVR EETFSKFQPK
VSYVYTGLPN LSLYANFSEG FRSGGFNQSG VGDLAASAGL SGVSDLYKAE ESSNFELGIK
GLYPDISTRF NASLFNTSID NQHYFVFVGS LGAQVLTNID EVSLIGGEFD FKTELHDNID
LYGSFGITDS EIKAYSLNPA DVGNKAPYVP EYTVNLGAQF HAELFSGWLS TLTLDWEQRG
EQYWDPSNTS ARDAINLVNA RLGFNRDEGD WSVNLWAKNL GNEEYLAEWV LGGFAHPAQE
RTFGIELRWN ME
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