| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4028 |
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| Symbol | |
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| ID | 6118378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4899576 |
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| End bp | 4901711 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635589 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001762379 |
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| Protein GI | 170728353 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCAG TGATTAAGGA GGAAAATATC ATGAAGGAAG GTAGGGTAAA AGATAAGGTC
TTCGTGACGA CAGATGTGGG CGGTACCTTT ACTGACCTTG TGTACTTAAG TGAGGATCCT
AAAACAGGAA GGCAGCAGCT TAAAACGGCA AAATCAGATA CCACTCCTCC CAACTTTGAA
CAGGGGGTGT TGAATGTCAT GGACAAAGCA CAGGTGGATG CCAAACAGAT AGATGTGATG
GCTCATGGTA CTACTGTTGT TATTAATGCC TTAACTGAAA GGAAGGGCGC CAAAACTGCG
CTAATAACCA CTCAAGGCTT CAGGGATGTT CTGGAGATTG GTCGAGGAAA CAGACCTGAC
TTCTTTAATC TTAACTACCA AAAACCACCA GCTTATGTAC CGCGGCATTT GCGGTTTGAG
ATTAATGAAA GAGTTAATTA TCACGGCGAG GTAACTCAGG CATTAGAGTT ACTCCCTTTG
GCAAATATCA TAAGGGAGTT GGAGGATAAG GGCGTTGAAG CTGTGGCAAT CTGTTTATTG
AACGCCTACA AGAATCCACA ACATGAAACT CTCCTTTCAA ACGCTATTAA TGCTTTGACG
GATAAGTTGG AGGTTATCTG CTCCCATCAA ATATCCCGAG AGTGGCGTGA ATATGAAAGG
ACGAGTACCA CGGTTCTGTC TGCTTATGTG CAACCTATCG CTTCGCGTTA TTTAAGCCGT
TTGCATCACG GTTTACAGGA GAAGGATTTC TCCGGTCAGC TCTATGTCAT GCAGTCTAAC
TGCGGTGTAG ATACCTTAAA ATCAGCTAAG CAGGTTCCGA TCACTATGGT GGAGTCTGGT
CCCGCCAGTG GTATATGGGG TGCTGCCGAA CTAGGTAAAA TAATCAATGA GCCCAATATC
ATTGCGTTAG ATATTGGTGG CACCACGGCC AAGTGCGCAC TAATTAGTGA TGGCGAGGTT
AAAATTACCT CAGACTATTA CATCGAAAAA AGTCATCTCA GCGCGGGGTA TCCGATTATG
GTACCTGTGG TTGATCTGGT TGAAATTGGT AATGGTGGTG GTTCAATCGC TTGGGTTGAT
GATTTTAATA AACTTCATGT GGGTCCTCAA AGTGCAGGGG CTTATCCTGG TCCCGTTGCT
TATGGCAAAG GCGGCACAGC ACCAACGACC ACAGATGCCA ATCTGGCTTT GGGCCGTATT
AATCCTGAGT TCTTCTGTGG CGGTGAATTA AAAGCGGATA TGGCCAGTGT TCAAACCTCT
TTAGAGAAGA TTGCCGCACC AATGGGTATC TCAACTCAAG ATGTGGCACG GGGGATCGTG
CGGATTGCCA ATAACAATAT GGTAAATGCG TTAAAGCTGG TTTCGGTCAA TCGAGGCCAT
GATCCACGAG ACTTTACTAT GGTTGCATTT GGCGGCGGTG GCGCCATGCA TGCAGCAGCA
CTGGCGGCAG AGCTAGGTAT TAAGAGATTG ATTATCCCCG CAACAGCCGC AGTATTCTCC
GCTTGGGGGA TGATGATGTC TGATATTCGC AGAGACAGAT TACTAACCTA CTTAAGTCCG
TGGGAACATC AAACCTTAGT ATTTATTAAT GAGCAGATGG CGCAGCTGTA CCAAGAGCTA
TCGGATGAGT TTATTAGTGA AAATTTCACA TCAAAAGATA CTCGATTTCA GTTCTTCGGC
AGATTTAGGT ATGAGAATCA GGAGCACTCT ATTGAGGTGC CTTTGCCATT GATACTTAAT
GAGAGTTCTA TCGATCAAGT CAGGGAGTCT TTTCAGCAAC TCTATAAACA GGAGTACACC
TACAACCTAG ATAATGAGAT AGAGCTGGTC GGATTGCATC TTGTTGGCAA AGCGGACGTT
GGCAAAGTGA AGTTAGCTAA ACAGCAGCAA AGCGGACGTT TGATTGCTGA AACCATCAAA
GGGGAGCGTG AAGTCGACTT TGCCGAAGAT GGCGTGCATA CCTCGGTAAT ATATGACGGT
GATCTGCTGG AGCCGATGAT GGCATTTTCC GGCCCTGCGA TTATCGAGCA AACAGGCACT
ACGATTGTCA TTCATCCTGA TCAAACCGTG TTTCTTGATG AATACAGCAA TGTGATTGTT
GAGCTGCTAA AGAATAAGGG AGGTGAACAT GTTTAA
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| Protein sequence | MKAVIKEENI MKEGRVKDKV FVTTDVGGTF TDLVYLSEDP KTGRQQLKTA KSDTTPPNFE
QGVLNVMDKA QVDAKQIDVM AHGTTVVINA LTERKGAKTA LITTQGFRDV LEIGRGNRPD
FFNLNYQKPP AYVPRHLRFE INERVNYHGE VTQALELLPL ANIIRELEDK GVEAVAICLL
NAYKNPQHET LLSNAINALT DKLEVICSHQ ISREWREYER TSTTVLSAYV QPIASRYLSR
LHHGLQEKDF SGQLYVMQSN CGVDTLKSAK QVPITMVESG PASGIWGAAE LGKIINEPNI
IALDIGGTTA KCALISDGEV KITSDYYIEK SHLSAGYPIM VPVVDLVEIG NGGGSIAWVD
DFNKLHVGPQ SAGAYPGPVA YGKGGTAPTT TDANLALGRI NPEFFCGGEL KADMASVQTS
LEKIAAPMGI STQDVARGIV RIANNNMVNA LKLVSVNRGH DPRDFTMVAF GGGGAMHAAA
LAAELGIKRL IIPATAAVFS AWGMMMSDIR RDRLLTYLSP WEHQTLVFIN EQMAQLYQEL
SDEFISENFT SKDTRFQFFG RFRYENQEHS IEVPLPLILN ESSIDQVRES FQQLYKQEYT
YNLDNEIELV GLHLVGKADV GKVKLAKQQQ SGRLIAETIK GEREVDFAED GVHTSVIYDG
DLLEPMMAFS GPAIIEQTGT TIVIHPDQTV FLDEYSNVIV ELLKNKGGEH V
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