| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3988 |
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| Symbol | |
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| ID | 6118338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4855255 |
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| End bp | 4855923 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641635550 |
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| Product | uracil-DNA glycosylase |
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| Protein accession | YP_001762340 |
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| Protein GI | 170728314 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0692] Uracil DNA glycosylase |
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| TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.409874 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACGAG TAAAAGATTG GGATGGTTTT CTTGCCGCAG AGAGGGAGCA AGACTACTAC
AGGGCACTGC AAGCTTTTGT TTTGGCAGAG CGTGCAAATG GCAAAGCTGT ATTTCCTCCT
GAAGCTGAGG TGTTCACAGC CTTTAACCTG ACTCCACTCG ATAAAGTCAG AGTGGTGATC
ATAGGCCAAG ATCCCTATCA TGGACCAGAT CAGGCTCATG GTCTCTGTTT CTCGGTGAAA
CATGGTATTA AAATACCGCC CTCTTTGGTG AATATGTATA AAGAGCTCGC GACCGACATT
CCCGGTTTTA CAGCTCCAGA GCATGGCCAT CTCTCCTCTT GGGCCGAACA GGGGGTTTTG
ATGCTCAATA CAGTGTTGAC GGTAGAGCAG GGGAAGGCAC ATTCACATGC AAAATCAGGT
TGGGAAACCT TTACTGGACA TGCAATGGAG CTGTTAAATC AACAAACATC TCCTATTGTA
TTTATTTTAT GGGGCGCTCA CGCCATTAAA AAAGGCAAAG TTATCACAGG CAAGCAGCAT
CATATCTTAT CTGGTCCGCA CCCATCTCCC CTATCTGCAT ACCGAGGTTT TTTTGGTTGT
CAGCACTTTT CGAAAACCAA TCAAATCTTA ACCTCACTTG GAACCCCTGA GATCAATTGG
CAGGTTTAG
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| Protein sequence | MTRVKDWDGF LAAEREQDYY RALQAFVLAE RANGKAVFPP EAEVFTAFNL TPLDKVRVVI
IGQDPYHGPD QAHGLCFSVK HGIKIPPSLV NMYKELATDI PGFTAPEHGH LSSWAEQGVL
MLNTVLTVEQ GKAHSHAKSG WETFTGHAME LLNQQTSPIV FILWGAHAIK KGKVITGKQH
HILSGPHPSP LSAYRGFFGC QHFSKTNQIL TSLGTPEINW QV
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