Gene Swoo_3984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3984 
Symbol 
ID6118334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4852545 
End bp4853168 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID641635546 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_001762336 
Protein GI170728310 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.815379 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCACCAAG GAACCACTCC TCCACAAAAG ATGACCAGCT CTGCGACCAT AAAACGCAGC 
GAGATAAGAT CCAATATTCG CGCAGCCAGA CGCAATATCT CCCCTCAGCA ACAAGCTTGT
TTTGGTCAGC AAGCCTGTGC ACATATGCTC ACTAAACTTG AGGAGCTTAA GGTAAAACGT
CTAGCCCTCT ACCTAACCAA TGATGGCGAA CTGGACACCC AGCCATTAAT TAAGGCTTTA
TGGCAAAATG ATATCGAGGT TTATCTGCCA AGGCTTCACC CCTTTAGTCA AGGCAACCTG
CTTTTTTTAG CCTATAGATC AAACACCAGC TTGGTACAAA ACTCCCTTAA GATTTGGGAG
CCAAAACTGG ATATTACTCA GATGATTTTG CCCCATCAAT TAGATGTGAT TGTCACACCT
TTAGTGGCGT TCGATGAGGC TGGAAATCGT ATGGGAATGG GTGGGGGATT TTATGACAGA
ACGCTGATGA ATTGGGAGCG AATGGGTTCA CCACTTCCTA TTGGTTATGC TCATGACTGC
CAGCAAGTCA ATCGTTTACC TTGTGAGCAT TGGGATATCC CCCTGCCAAT GATTATCACC
CCTACTAAAA CATGGAAGTT TTAA
 
Protein sequence
MHQGTTPPQK MTSSATIKRS EIRSNIRAAR RNISPQQQAC FGQQACAHML TKLEELKVKR 
LALYLTNDGE LDTQPLIKAL WQNDIEVYLP RLHPFSQGNL LFLAYRSNTS LVQNSLKIWE
PKLDITQMIL PHQLDVIVTP LVAFDEAGNR MGMGGGFYDR TLMNWERMGS PLPIGYAHDC
QQVNRLPCEH WDIPLPMIIT PTKTWKF