Gene Swoo_3909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3909 
Symbol 
ID6118258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4763881 
End bp4765953 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content49% 
IMG OID641635471 
Productendothelin-converting protein 1 
Protein accessionYP_001762262 
Protein GI170728236 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3590] Predicted metalloendopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000503198 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CCTTAATCGC TATCGCCTTA GCCAGCACAT TTTTAGCGGC TTGCGGCACA 
TCAGAAGTTA AAAACAGTGA CGTTGAGAAG GCAGTGACAG CAGCCAGTTC AACCAAGGCA
GAGCTAGGTA GTTTTGGTGT TGATCTATCG GCGCGTAACG AAGCCGTTAA GCCTGGCGAT
GACTTTTTTA TGTATGCCAG CGGCACTTGG TATGACAACT ATGTGATGCC TGCAGACAAG
ACTCGCTTTG GCGCCTTTAC CGGTTTAGCT GAGCGCAGCG AAAAGCAGGT TAAAGAGATC
ATCGATGATA TCGCCAGCCG CAGCGACCTT AACGCTGAAG AGCAGCTAAT TGCCGATTTC
TATCAAGCTT ATATGGATAC AGATACTGCT AACAAGCTGG GTATCACTCC AATCCAACCT
ACTTTAGATT CAATCAAGCA GATCAAATCG ACCGATGATT TAACTAAGAT CTTCGGCGGC
GCTTGGCTAA CAGGTGCAAG CTCACCTATC GCAGGCGGTA TGTGGTTTAA CCGCTTAGAT
CCAAATCAGT ATGAGATGTC AATGGGTGCC ACTGGATTAG GCCTTCCCGA CCGCTCCTAT
TACCTTGAAG ATAGCGAACG CTTTGTCAAA ATCCGCACCG CCTATGTTGA GCATATCGCC
GAGATGCTTG CCTTTGCAGG GATAAAAGAT GGTAAAGCTC GTGCAACTGA AATTTTAGCC
CTAGAGACCA AGATGGCCGA AGGTCAATGG CCTCGTGAGA AGCGTCGTAA TCGCGATCTG
ACCCTAAACC AGATAAAGCG TACTGAGCTT GCTAAAGAGT ACCCAGGGTT TAATTGGGAT
CTCTACTTCA AGGAGACTGG TTATCAGGTT CCTCAGCTGA ATATGTCACA GCCTGAGCCG
ATTAAAGCGA TGATCGCCTT GGTCAACCAA GAGCCACTCA ATGTATGGCA GGATTACCTG
ACCTTCCACA CCATCAGCAA TAATGCAGGT TTACTCTCTG AAGATATCTA CGCCGCTAAC
TTTGCCTTTA ATGGCAAGAC ATTAAGCGGA CAGGAGGAGC CTCGCCCACG TTGGAAGCGT
GCAATTTCTG AAATGTCAGG CACTCAATCG CTTGGCTTTG CCATTGGTAA GGTTTATGTG
GCGCGCTACT TCCCTGAGTC GTCTAAGCAG CAGATGGCTG AGCTAGTTGA AAACCTACGC
ACAGCTATGG GTGAGCGTAT CGACGGCCTG GATTGGATGG GCGCAGACAC TAAGGTTAAC
GCTCATGCAA AACTTGCCGC ATTTAACCCT AAGATTGGCT ACCCAGATGT GTGGCAAGAG
TTTGATGGTC TTAAGTTAAC CAATAAAGAT CTAGTAGGAA ATATCCAAAA CCTACGTCAA
TACTTTAAAG CCGACAGCAT AGCCAAAGAG CTAAAGAAAA CTGACCGTAA CCGTTGGGGC
ATGACACCTC AGCGTGTGAA TGCCTATTAC AACAGCTCGT TTAACGAGAT TGTGTTCCCT
GCGGCAATTT TGCAACCACC GTTTTTCGAT CCTAATGCCG ATCCAGCGGT TAACTACGGT
GGTATTGGTG CCGTTATCGG TCACGAGATG GGCCATGGTT TCGATGATCA AGGTTCAAAA
TCAGATGCAA ACGGTATTCA GCGTAACTGG TGGACAGATG CTGACCGCGC TGCATTTGAA
GCCAAAGCCG ATCAGCTTGC CGCGCAATAC AGCAAATATG AGCCAATTCC AGACAACTTC
GTCAACGGCC GTAACAGCCT AGGTGAGAAT ATTGGCGATG TGGGTGGCCT CTCTATGGCA
TACCACGCCT ACAAGCTAAG CTTGAACGGT AAAGAAGCCC CTGTGATCGA CGGCGTAACT
GGCGATCAAC GCTTCTTCCT TGCTTGGGCA CAGGTATGGA AAGAGAAGCG CACCGAGCAG
AGCATGCTAA ACCAGCTACG TGCGGGTACT CACGCGCCTG GTCGTTACCG CGCACAAGCT
CCACGTAACC ATGATGCTTG GTACAAGGCT TTTGATGTAA AACCGGGTGA TGAGTTGTAC
CTTCCTGAAG ATCAGCGCGT TCGCATCTGG TAA
 
Protein sequence
MKKSLIAIAL ASTFLAACGT SEVKNSDVEK AVTAASSTKA ELGSFGVDLS ARNEAVKPGD 
DFFMYASGTW YDNYVMPADK TRFGAFTGLA ERSEKQVKEI IDDIASRSDL NAEEQLIADF
YQAYMDTDTA NKLGITPIQP TLDSIKQIKS TDDLTKIFGG AWLTGASSPI AGGMWFNRLD
PNQYEMSMGA TGLGLPDRSY YLEDSERFVK IRTAYVEHIA EMLAFAGIKD GKARATEILA
LETKMAEGQW PREKRRNRDL TLNQIKRTEL AKEYPGFNWD LYFKETGYQV PQLNMSQPEP
IKAMIALVNQ EPLNVWQDYL TFHTISNNAG LLSEDIYAAN FAFNGKTLSG QEEPRPRWKR
AISEMSGTQS LGFAIGKVYV ARYFPESSKQ QMAELVENLR TAMGERIDGL DWMGADTKVN
AHAKLAAFNP KIGYPDVWQE FDGLKLTNKD LVGNIQNLRQ YFKADSIAKE LKKTDRNRWG
MTPQRVNAYY NSSFNEIVFP AAILQPPFFD PNADPAVNYG GIGAVIGHEM GHGFDDQGSK
SDANGIQRNW WTDADRAAFE AKADQLAAQY SKYEPIPDNF VNGRNSLGEN IGDVGGLSMA
YHAYKLSLNG KEAPVIDGVT GDQRFFLAWA QVWKEKRTEQ SMLNQLRAGT HAPGRYRAQA
PRNHDAWYKA FDVKPGDELY LPEDQRVRIW