| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3905 |
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| Symbol | |
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| ID | 6118254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4758249 |
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| End bp | 4760459 |
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| Gene Length | 2211 bp |
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| Protein Length | 736 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635467 |
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| Product | catalase/peroxidase HPI |
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| Protein accession | YP_001762258 |
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| Protein GI | 170728232 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0376] Catalase (peroxidase I) |
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| TIGRFAM ID | [TIGR00198] catalase/peroxidase HPI |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.211308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTAAGA AAACAATCTT ATCTTTTGTC ATATCTGCGG TGATGGTTAC CGCCGCTTCT
GCGGTGGAAA ATGAACAACC TAAATCCAAC CAGTTCTGGT GGCCAAATCA ATTAGATTTA
ACCCCTCTTA GAAATCACAG CGATGAGTCA AACCCACAAA ATAGCAATTT TGACTATGCA
GAAGCCTTTG AAAAACTCGA TCTTGAAGCT GTAAAAAAGG ATATCGATAA AGTACTCACC
AACTCACAAG ATTGGTGGCC TGCTGATTAT GGTCACTATG GCCCATTCTT TATTCGAATG
GCTTGGCATG CTGCTGGCAC CTATAGAACC CACGATGGCC GAGGTGGAGC GGGAGGCGGA
CAGCAACGTT TTGACCCACT CAACAGCTGG CCAGATAACG TCAACTTAGA CAAGGCAAGA
AGGCTACTTT GGCCGATAAA ACAGAAATAT GGACAGAGTA TCTCTTGGGC CGATCTTATC
GCATTAACCG GAAACGTGGC ACTCGAGTCT ATGGGATTTA AGACCTATGG CTATGCCGGC
GGTCGAGAGG ATGATTGGGA ACCTGACCTC GTCTATTGGG GTCCAGAGAG TAAGTTTCTC
ACCGACGAGA GACGTGATAA AAAAGGCAAG CTCAAAGGCC CACTAGCCGC AGTTGAGATG
GGACTTATTT ATGTTAACCC CGTCGGCCCA CACGGCAACC CTGATCCACT GCTCGCCGCT
AATGATATCC GCATGTCTTT TGGTCGTATG GCGATGAATG ATGAAGAGAT TGTTGCCCTT
ATTGCAGGTG GACACACTTT CGGTAAAGCC CATGGCGCAA AAAAACCAAC TGAGTGCGTA
GGTCCAGAGC CCGCTGCTGC CGCAGTAGAG GAGCAAGGAT TTGGTTGGAA AAATCGCTGT
GGAACAGGCT CAGGTGCCGA TACCACATCC AGTGGATTAG AGGGAGCATG GACAATCACT
CCAACTCAGT GGACCACTAA CTATCTCGAT AATCTATTTA CCTTTAATTG GGTGAAAACT
AAGAGCCCAG CTGGGGCGAT TCAATGGATC CCAGATACAG ACACCGCTGC TAACTTAGTA
CCTGATGCCC ATGACCCCAC TAAGCGTCAT GCCCCCATCA TGTTCACCAC AGATATCGCC
ATCAAGGAAG ATCCTAAGTT TAGGGCGATA GCCGAGAGTT TTAGAAAGTC ACCAGACAAA
TATGAACTCG CATTTGCTAA AGCTTGGTTC AAATTAAATC ACCGCGATCT GGGCCCGCGT
TCTCGCTACT TAGGGAATGA GGTACCTAAA GAGGTGCTGG TTTGGCAAGA CCCTATCCCT
GAGCTAAACC ACCCTGTCGT CAATGATGCC GATATCGCTA AACTGAAATC AGAGATACTC
AAATCAGGTC TCTCAGTTCA AGATCTTGTG CTCACAGCTT GGGCGTCAGC ATCGAGCTAC
CGCGGCACCG ATATGCGTGG TGGCGCCAAT GGTGCTCGCA TCAATCTATC ACCGCAAAAT
GAGTGGCAGG TTAATAATCC GAAACAGCTA GCTAAGGTGC TAAATAAGCT AGAGAAGATT
AAAGACAAAT TTAATAAAAA GTCTAAAAAA GCCAAGATAT CTCTTGCCGA TCTCATTGTA
TTGGGCGGTG CTGCGGCCAT CGAAAAGTCG GTAAAAGAGG CAGGTTTTAA CAATAAGGTC
CCCTTCACTC CAGGCAGAAT GGATGCCAGC CAAGCGATGA CAGATGTGGC CTCTTTTGGG
GTGTTAGAGA GCACGGCCGA TGGGTTTAGA AACTACTACT CTGATGAGAG TAACCTCTCT
CCAGCACAGA TGCTGATTGA TAAAGCAGAT CTACTGACGT TAACCGTGCC AGAGATGACC
GCATTAGTTG GTGGTATGAG GGCGTTATCA GCCAATGCCG ACGGCTCCAA TCACGGAGTA
TTTACCGATC AGCCCGGCGT ATTGTCCAAT GACTTTTTCG TCAATCTACT CGACATGTCT
GTTAAGTGGT CTAAAAAGCC TAAAAGCGAG GCACTTTATG AGGGCTATGA CAGAAAAACA
GGTAAGCTGA AGTGGACTGC TACCCCAGTG GATCTGGTGT TTGGATCTAA CACTGAGCTT
CGTGCCATCA GTGAGTTTTA TGCTTCTAAA AATGCTGAAG AGCAGTTTAT CACTGACTTT
ATCGCCGCTT GGCATAAGGT GATGGTCAAT GATAGATTCG ATATAAAGTA A
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| Protein sequence | MFKKTILSFV ISAVMVTAAS AVENEQPKSN QFWWPNQLDL TPLRNHSDES NPQNSNFDYA
EAFEKLDLEA VKKDIDKVLT NSQDWWPADY GHYGPFFIRM AWHAAGTYRT HDGRGGAGGG
QQRFDPLNSW PDNVNLDKAR RLLWPIKQKY GQSISWADLI ALTGNVALES MGFKTYGYAG
GREDDWEPDL VYWGPESKFL TDERRDKKGK LKGPLAAVEM GLIYVNPVGP HGNPDPLLAA
NDIRMSFGRM AMNDEEIVAL IAGGHTFGKA HGAKKPTECV GPEPAAAAVE EQGFGWKNRC
GTGSGADTTS SGLEGAWTIT PTQWTTNYLD NLFTFNWVKT KSPAGAIQWI PDTDTAANLV
PDAHDPTKRH APIMFTTDIA IKEDPKFRAI AESFRKSPDK YELAFAKAWF KLNHRDLGPR
SRYLGNEVPK EVLVWQDPIP ELNHPVVNDA DIAKLKSEIL KSGLSVQDLV LTAWASASSY
RGTDMRGGAN GARINLSPQN EWQVNNPKQL AKVLNKLEKI KDKFNKKSKK AKISLADLIV
LGGAAAIEKS VKEAGFNNKV PFTPGRMDAS QAMTDVASFG VLESTADGFR NYYSDESNLS
PAQMLIDKAD LLTLTVPEMT ALVGGMRALS ANADGSNHGV FTDQPGVLSN DFFVNLLDMS
VKWSKKPKSE ALYEGYDRKT GKLKWTATPV DLVFGSNTEL RAISEFYASK NAEEQFITDF
IAAWHKVMVN DRFDIK
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