| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3890 |
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| Symbol | |
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| ID | 6118239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4742254 |
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| End bp | 4743216 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641635452 |
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| Product | folate-binding protein YgfZ |
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| Protein accession | YP_001762243 |
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| Protein GI | 170728217 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0354] Predicted aminomethyltransferase related to GcvT |
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| TIGRFAM ID | [TIGR03317] folate-binding protein YgfZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00117726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000179046 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCCAGT CTGTTTCTCA GCTCGCTTGG AATCCGAGTG AATCCGCTCA ACTTATCTTT
GCTAACCTGT CTCATATGGG ATTGATGAGT GTGACTGGCG AGCAAGGCCG TAGCTTCATT
CACGGGCAGG TCACCACAGA TATCAGCTCA CTTGAGAGCA ACCAATGGAG ATGGGGTGCT
CACTGCGATC CTAAAGGAAA GATGCTGGCC AGTTTCAGAA CCTTCTCGGT TGCAGATGCC
CTCTTTATGA TGATGCCAAA AGATACCTTG GCGGCAGATC TACCACAACT GGCTAAATAC
GCCGTGTTCA GCAAGGCTGA CCTTGTTGAT GTATCTGCAG ACTGGACCAT CTTAGGCGTA
GCTGGAGAGC AGGCACAGGA GTGGGTAAAT AACTACTTTG GTGAGATCAC CCAAGAGTTA
ACTGAGATCC CAGGCGGTGT ACTGCTTAAA GATGGCGAAC GCTTTATTAT CATTATAGAG
AATGCCCCTT CTGAGCCACT ATTAAGCTCA ATCAATACGC CAATCCAAGA AAGTAGTGCA
TGGCAAGCAT TGGAGATCCA AGCTGGCCTG CCTAACCTAG GCGTCTCACA TCAAGGTCAA
TTTGTGCCGC AGATGTGTAA TGTACAAGCA ATTAACGGTA TCAGCTTCAA AAAAGGTTGC
TACATGGGCC AAGAGACCAT CGCACGCATG AAATACCGTG GCGGCAATAA GCGCGCCCTC
TATATTCTCT CAGGCACCAG CTCACAAACC TTAGCGCTAG ACAGCCGATT GGAGCTTGCC
ATCGAAGATG GCTTTAAAAA GGTCGGTACC ATTATCGAGC TAGTGCAATC AGGCGATCAG
GTACTGCTTA GTGCTGTCCT ACCTAATGAC ACGGAAAACA GCGCCAAGTT AAGAGTTGCC
GACGATGAGA CCTCAAGCCT AACTATTCAG CCACTGCCCT ACTCACTAGA AGATGAAGCT
TAG
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| Protein sequence | MTQSVSQLAW NPSESAQLIF ANLSHMGLMS VTGEQGRSFI HGQVTTDISS LESNQWRWGA
HCDPKGKMLA SFRTFSVADA LFMMMPKDTL AADLPQLAKY AVFSKADLVD VSADWTILGV
AGEQAQEWVN NYFGEITQEL TEIPGGVLLK DGERFIIIIE NAPSEPLLSS INTPIQESSA
WQALEIQAGL PNLGVSHQGQ FVPQMCNVQA INGISFKKGC YMGQETIARM KYRGGNKRAL
YILSGTSSQT LALDSRLELA IEDGFKKVGT IIELVQSGDQ VLLSAVLPND TENSAKLRVA
DDETSSLTIQ PLPYSLEDEA
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