| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3878 |
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| Symbol | |
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| ID | 6118227 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4725576 |
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| End bp | 4726751 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635440 |
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| Product | aromatic amino acid permease |
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| Protein accession | YP_001762231 |
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| Protein GI | 170728205 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0814] Amino acid permeases |
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| TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00957771 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000285867 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTTGGCT CAATTGCCAT CGTCGCCGGA ACTGCGATTG GCGCAGGAAT GTTAGCACTG
CCTCTGGCGA CCGCTGCACT GGGGATCATC CCAGCTATTC TGCTATTGGT CGTTATCTGG
GGAGTTTCAG CTTACACCTC TTTGTTGATG CTTGAGGTAA ACCTACGTAC TGGTGTAGGT
GACAATCTCC ATGCCATTAC AGGTAAGATT TTAGGCAAGC GGGGACAGCT AATACAGGGT
GCGTCCTTCT TAAGTTTGCT GTTTGCCCTT ACGGCAGCCT ATCTGACAGG TGGCTCCTCC
TTGCTGGTAT TAAAAGCTGA GGCGATGTTT GGCATTGCTT TGGATAATCA GCTTGCGGTG
GTGATATTTA CCCTGACTTT AGGCCTGCTA GCCGCATTCG GTGTAGCTTG GGTCGACAAG
GTTTCTCGTA TTCTGTTTTC ACTGATGATC GCCTTGCTAG TGATCACTGT GGGTTTCCTC
TTACCTGAAA TTAGCCCTTC ACAGATGGCG ATTGCGGCAA TTGAAGAGGG TAAGGTTGAT
CTTTGGATGG CAGCCATCCC TGTTGTTTTC ACCTCTTTTG GTTTCCATGT GTGTATCGCA
ACCTTAGTGC GTTACTTAGA GGGTGATGCA TTAACGCTGC GCAAAGTACT TTTGATTGGC
TCAACGTTAC CGCTGCTGTG TTATGTGCTC TGGTTGTTAG TGACGTTAGG AACAGTGGGG
GGAGAGCAGA TCCATAGCTT TGGTGGCTCA CTGCCTGCAC TTATTACATC GCTGCAGGAT
ATCGCCTCAC AACCTTGGGT AAGTAAGTGT ATTTCGCTGT TTGCTGACTT TGCTTTAGTG
ACCTCCTTTA TCGGTGTGAC CTTAAGTTTG TACGATTTTA TCAGTGAGCT GACACGAGCG
AAGAGTACCA TTATGGGCCG AGTTCAAACT TGGTTAATCA CCTTCGTTCC ACCTGTGTTA
TGTGCGCTTT ATATTCCTGA AGGCTTTGTT GCAGTACTCG GTTTTGCGGC TGTGCCTTTG
GTATTTATCA TCATCTTCTT GCCGATTGTA ATGGTCTTGA AACAGCGCAA AGAGGTGACT
GAAGGTTATC AAGTCTGCGG CGGTAAGCCA GCGTTAACGC TAGTGGGCTT GTTAGGGGCG
GTGATTATTG CAGCCCAACT GATGGTGGCG CTTTAA
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| Protein sequence | MLGSIAIVAG TAIGAGMLAL PLATAALGII PAILLLVVIW GVSAYTSLLM LEVNLRTGVG
DNLHAITGKI LGKRGQLIQG ASFLSLLFAL TAAYLTGGSS LLVLKAEAMF GIALDNQLAV
VIFTLTLGLL AAFGVAWVDK VSRILFSLMI ALLVITVGFL LPEISPSQMA IAAIEEGKVD
LWMAAIPVVF TSFGFHVCIA TLVRYLEGDA LTLRKVLLIG STLPLLCYVL WLLVTLGTVG
GEQIHSFGGS LPALITSLQD IASQPWVSKC ISLFADFALV TSFIGVTLSL YDFISELTRA
KSTIMGRVQT WLITFVPPVL CALYIPEGFV AVLGFAAVPL VFIIIFLPIV MVLKQRKEVT
EGYQVCGGKP ALTLVGLLGA VIIAAQLMVA L
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