Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3853 |
Symbol | |
ID | 6118202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4698833 |
End bp | 4699633 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635415 |
Product | hypothetical protein |
Protein accession | YP_001762206 |
Protein GI | 170728180 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAT CCCGTTTACA AGCCTTCACA GAGTTACATA CTAAAATAGC CAAGCCTAAT ACTGCGACCC AAGTTTCAGC GCCGTTAGTC TTTATTAATA TTTGGGACGC GGCCAGTGCT GCAGTCGTTC AAGCATCGGG GGCCAAAGCA TTAGCTACAA GTAGTGCATC ATTGGCTTGG TCTTTGGGTT ATCCAGATGG CGAAGCGCTC CCCCAGCAGG AGTTACTCGA TGCTGTCGCT CGAATTATAC GTGTCAGTGA GCTTCCTCTT AGCGTGGATA TTGAAGCGGG CTACAGTGAT GACCCCTCTG AGGTCGCCTC TTTGGTCGCT AAGCTTGTTA ACTTAGGTGT GGTTGGCGTC AATTTAGAGG ATGGGGCACA AGAGCCTGAG CTTTTAGTTG CTAAAATTGA GGCTATTCGT GCCACAAAGA GTTGCCGTAC TCTGTTTATT AATGCCCGAA CTGATGTGTA TTTAAGGGCG CTTGCATCAG ATAGAGCCGC CGTTGAGATG ACTAGAAGGC GCTTACTTAG TTATCAAAAT GCGGGGGTTA ATTGTGGCTT TATTCCTGGA CTTAGTTGTG AGCAAGTGGC TAGCGAACTT GCCAACGAAA TCCAAATGCC ACTGAATTTG ATGGTCGATG CCAACCTTTC CACTGTTGAT ACACTGTTTA AATCTGGGAT AACTCGTTTC AGCGTGGGGC CAGCAAGCTT TCTCAATGCC TATTCAGGAC TTAGCTCAAA GTCTGGTATA GAGCCTAGCC CATTGGATTA CAATAGAGTG AATGAGCTTC TAGTCTTATA G
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Protein sequence | MFESRLQAFT ELHTKIAKPN TATQVSAPLV FINIWDAASA AVVQASGAKA LATSSASLAW SLGYPDGEAL PQQELLDAVA RIIRVSELPL SVDIEAGYSD DPSEVASLVA KLVNLGVVGV NLEDGAQEPE LLVAKIEAIR ATKSCRTLFI NARTDVYLRA LASDRAAVEM TRRRLLSYQN AGVNCGFIPG LSCEQVASEL ANEIQMPLNL MVDANLSTVD TLFKSGITRF SVGPASFLNA YSGLSSKSGI EPSPLDYNRV NELLVL
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