Gene Swoo_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3853 
Symbol 
ID6118202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4698833 
End bp4699633 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content47% 
IMG OID641635415 
Producthypothetical protein 
Protein accessionYP_001762206 
Protein GI170728180 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2513] PEP phosphonomutase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAT CCCGTTTACA AGCCTTCACA GAGTTACATA CTAAAATAGC CAAGCCTAAT 
ACTGCGACCC AAGTTTCAGC GCCGTTAGTC TTTATTAATA TTTGGGACGC GGCCAGTGCT
GCAGTCGTTC AAGCATCGGG GGCCAAAGCA TTAGCTACAA GTAGTGCATC ATTGGCTTGG
TCTTTGGGTT ATCCAGATGG CGAAGCGCTC CCCCAGCAGG AGTTACTCGA TGCTGTCGCT
CGAATTATAC GTGTCAGTGA GCTTCCTCTT AGCGTGGATA TTGAAGCGGG CTACAGTGAT
GACCCCTCTG AGGTCGCCTC TTTGGTCGCT AAGCTTGTTA ACTTAGGTGT GGTTGGCGTC
AATTTAGAGG ATGGGGCACA AGAGCCTGAG CTTTTAGTTG CTAAAATTGA GGCTATTCGT
GCCACAAAGA GTTGCCGTAC TCTGTTTATT AATGCCCGAA CTGATGTGTA TTTAAGGGCG
CTTGCATCAG ATAGAGCCGC CGTTGAGATG ACTAGAAGGC GCTTACTTAG TTATCAAAAT
GCGGGGGTTA ATTGTGGCTT TATTCCTGGA CTTAGTTGTG AGCAAGTGGC TAGCGAACTT
GCCAACGAAA TCCAAATGCC ACTGAATTTG ATGGTCGATG CCAACCTTTC CACTGTTGAT
ACACTGTTTA AATCTGGGAT AACTCGTTTC AGCGTGGGGC CAGCAAGCTT TCTCAATGCC
TATTCAGGAC TTAGCTCAAA GTCTGGTATA GAGCCTAGCC CATTGGATTA CAATAGAGTG
AATGAGCTTC TAGTCTTATA G
 
Protein sequence
MFESRLQAFT ELHTKIAKPN TATQVSAPLV FINIWDAASA AVVQASGAKA LATSSASLAW 
SLGYPDGEAL PQQELLDAVA RIIRVSELPL SVDIEAGYSD DPSEVASLVA KLVNLGVVGV
NLEDGAQEPE LLVAKIEAIR ATKSCRTLFI NARTDVYLRA LASDRAAVEM TRRRLLSYQN
AGVNCGFIPG LSCEQVASEL ANEIQMPLNL MVDANLSTVD TLFKSGITRF SVGPASFLNA
YSGLSSKSGI EPSPLDYNRV NELLVL