Gene Swoo_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3848 
Symbol 
ID6118197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4692637 
End bp4693182 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content47% 
IMG OID641635410 
ProductOsmC family protein 
Protein accessionYP_001762201 
Protein GI170728175 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.323457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACT TACCTCTAAA CGGAATCAAA CTCGATGATC TGGCAGCCTA CACGCAAGTG 
ATCACAGATA ATCCAGCCGA AGCGATCTCT GAATACGGTA TTGTAGCGCA ATGGAAAGGC
GGCGTTCATA GCGAAATTCG CACTTTAAAT CAGAAAGTGG GCGGTAAAGA GATCGTCAAA
GATTTTCGTT TTCAAGTTGG TGAGCCTGAA GAGCTTCTTG GCAATAATGC TTACCCTACT
CCGCAAGACT ATCTGCTAGG TGGTATGGCT GGCTGCATGA TGGTGGGATT TGTCGCTGGC
GCCAGTGCCC GTGGCATTAA ACTCGACGAA GTGAGCTTGA CCATTAAAGG TGCACTCAAT
CTACGCGGTT TCTTAAATGT CGATCCCGAT GCGCCAGTGG GCTTTGCCGA GGTTAAATTT
CACTTTGAAG TGAAAGGCGA CTCAACTCAA GCTGTATATG ATGAAGTGAT TGCTGGTGTG
CAACAGTTCT CACCCAATTA CCGCACCATT AGTGACGCCG TTAAAGTGTC AGCGACAGCT
GTGTAA
 
Protein sequence
MNNLPLNGIK LDDLAAYTQV ITDNPAEAIS EYGIVAQWKG GVHSEIRTLN QKVGGKEIVK 
DFRFQVGEPE ELLGNNAYPT PQDYLLGGMA GCMMVGFVAG ASARGIKLDE VSLTIKGALN
LRGFLNVDPD APVGFAEVKF HFEVKGDSTQ AVYDEVIAGV QQFSPNYRTI SDAVKVSATA
V