Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3847 |
Symbol | |
ID | 6118196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4691806 |
End bp | 4692573 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641635409 |
Product | ThiJ/PfpI domain-containing protein |
Protein accession | YP_001762200 |
Protein GI | 170728174 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.607984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATC TATTTAAAAC TATTTCTGTC TTGCTATTTG TAGCATCCAG CCTCTTTGGC GCCTCTTCTG TATATGCGGA AGGTCCAAAA CGTGTACTCA TAGTCATGTC ATCAGAGAGC GCAATGGGTA TAAGCGGTAA ACTCACAGGA ACTTGGTTTG AAGAGGTAGC GACACCTTAT TACACATTAC GTAAAGAGGG CTATGAGGTC GTTATGGCAT CTCTTGAAGG AGGTGATGCT CCAATAGATC TATTGTCTAT GCAAGCACCA TTCACTACCC CTAATACAGA TAAATTCTTA AATGACATTG TTGCAATGCA TGCCCTGGAG AACACCAATA AGTTGAGTGA AATCAATCCT GATGACTTTG ATGCTCTATT TTTCCCTGGT GGCTACGGCT TACTTTGGGA TTTAGCAAGC GACTCAATGA CAATCAAAAT GATTGAAGAT TTCTACGCTG CAAATAAGCC AATTGCAATG GTATGTCATG CGCCTGCAAT TCTTAGAGAT GCCAAAAAAG CCAATGGTGA GCCCTTAGTA AAAGGTTTAA CTGTGACTGG CTTTATGAAT GCTGAAGATG ATGAGCTGGA CCTTTCTCGC CACCTATTAT TCTCTCTTGA GGATATGCTG AAAGCAAACG GCGGAAACTA TAAGAAAACA AAGAAAAACT GGGTTGCTCA CATAGAAATT GATGGACCTC TAATGACTGG ACAAAACCCA GCTAGTGCTC CTGTATTAGC AAAAGCCCTT GCAAAACGCT TGAAATAA
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Protein sequence | MKNLFKTISV LLFVASSLFG ASSVYAEGPK RVLIVMSSES AMGISGKLTG TWFEEVATPY YTLRKEGYEV VMASLEGGDA PIDLLSMQAP FTTPNTDKFL NDIVAMHALE NTNKLSEINP DDFDALFFPG GYGLLWDLAS DSMTIKMIED FYAANKPIAM VCHAPAILRD AKKANGEPLV KGLTVTGFMN AEDDELDLSR HLLFSLEDML KANGGNYKKT KKNWVAHIEI DGPLMTGQNP ASAPVLAKAL AKRLK
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