| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3777 |
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| Symbol | |
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| ID | 6118126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4603699 |
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| End bp | 4605804 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635340 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001762131 |
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| Protein GI | 170728105 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.215477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0067097 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCACATT TACTCAGCAC GTGCTTTGAT AAAATGAACG CCATGAAATA TTTACTGTTT
TTACTCTCTT TTACGCTTTT TACTCCGCTG TTTTCCTATG CAGATACTCA GCCAAAGCAG
AGCATAGTGT TCGGTGTTCA CTCCAAGACA GCTCCGCTTG AGTGGCGAAA TAACGGCGTT
GATCAAGGCT TTAATATCGA GCTAATGAAT CGTATTGGCC AAATGTGTAA CGCAAGAATT
CTGACAAGGC GTAAAACCTT CCAGCAACTG CTGAGCGATG TTCACTCACC CGAGAGTGAT
ATCGATGTCA TCGCCATTGT CAGCCCTGTC ACTATCGACA GAGACCTGAG TCAATCCGAT
CCCATCTATG CTACCCATGC CAAAGCCTAT ACTCTGCAGG GGAAAGCGTT TATTAATGGC
TGGCATGATC TGGTTGGTAA ACGTGTTGCT ATCAAAAAAG GCGCATTTGT CGACGTTTAT
CTCTCAGGTC AAGAACAAGA GTTTGAGCGC ATAGATGTCG ATCTTTATGA AACAGGCTTC
CAACTGCTTA TAAAAGGTCA AGTCGATGTC GTTCTTGCTG AAAACTTTGT CGCCAGACGA
CTCCTGCCCT TCTACCCCTC GATCAGAAGC TCCAGTGATC CACTGATATA TGGTGCTTTT
AATTTTGTCA CCAACGGTAA AAATGCGCCT TTAATGGCAA AAATTAATGA AGCCCTAAGG
CAGCTCAAGC TGTCTGGTGA ATATGACAAA CTCGTCAATA AGTGGTTCGG TACAGGCCGA
GAAAAAGTTG ATCTGACGAC AACTCAACAG AAGATGTTAT GGCTGGCAAT CTTAGTTAGC
ATTATCTCAG CGTTTGGCAT GATACTCACC GCCTACATCA GTGCAAGTCT GCGCAAACGG
ACCCTATCTC TAAAATCAGA GCTGGTGCAG CGCCGTAAAG CTGAGCAGCA GATATTAAGT
CTGTCTCAGC AGTTTCAATC CGTTCTTAAT GGTATTCCAC ATGGGGTCAC CATATTTAAT
CGTAGATGCG AATGTCTATG GAGTAATGAC AAAAATAACC TGCTGCTAAA AAGCCCAGAG
TTCCACTTTA CCCAAGGTCA GGTATTTCAG CTCGATGACT CGTTAATCGA AGTGTTAAAT
GAGCAAAAAT CCCTCACGGC TGATATGAGT TATCATGCTC AATATTGGCA ACTGCAGATC
CACCCTATTG CCGAAGATCA AGCCGTGATC CTGCTTGAGG AGACCACAGA GCAGCAAGCC
CTGAGGCAAG CTAATAATGA AGCAAGTAGG TTAGCCTCTT TAGGTGAGCT CTCAGCAGGT
GTTGCCCATG AGATAAACAA CCCTACTGGG CTTATCATTC ACTCTATCGC CTTTTTAAAC
CACGCACTTT GCGATCTAAA ACCCGCAGCC CACCACTATA CTCAGCAAAA TCCATTTTGG
TCTGTTGCGG GATTAGATCC TAATCAAGCC ATCGAAGAGT TGGAGATAAG CTGTGCAACG
ATAGATGAGG GAGCAAACCG GATAAGTAGA ATTGTGAGCG ATCTAAAGTG TTATGCAAGA
CCCAATATCG CCAACAAACA TAGGCCAATG AAACTGAATG AGGTGGTCAC AGTATCGCTA
CGTCTCACTG CAAATCAGAT CAAGTTATTT AATCTAACGA CTCATCTTCA GCTGCCCGAG
CCAGAGTTGA TGGGGGATGC CCAGCAGCTA CAGCAGGTAT TGATTAATCT GATACAAAAC
GCGTGTCATG CCTCAAAACC TATATCAGAC AGTATACCTA GCCTTATCAC TATCGAAACC
TATACCCGAG ATAGCGATCA CTATTTAACG ATAACTGACA CAGGTGCGGG AATGGATGAC
GCCACACTAA AGCGGATCAC TGAGCCTTTC TTTACCACCA GACGTTCCAG TGGCGGTACA
GGCTTAGGCC TGTCTGTTTG TAGCCGAATA ATTAAAGAGC ATAACGCACA GATGCAGATA
AATTCACGCC TAGGAAAAGG CACAAAAATT AGCATTCGAT TCCCCTTGAT CACAGCAATA
ACAAAGCAAA TGCCAGAGCA ACAATCAGAG CAAGAGAGAA CAGTAAGTTT GGAGACAGAG
AGATGA
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| Protein sequence | MPHLLSTCFD KMNAMKYLLF LLSFTLFTPL FSYADTQPKQ SIVFGVHSKT APLEWRNNGV
DQGFNIELMN RIGQMCNARI LTRRKTFQQL LSDVHSPESD IDVIAIVSPV TIDRDLSQSD
PIYATHAKAY TLQGKAFING WHDLVGKRVA IKKGAFVDVY LSGQEQEFER IDVDLYETGF
QLLIKGQVDV VLAENFVARR LLPFYPSIRS SSDPLIYGAF NFVTNGKNAP LMAKINEALR
QLKLSGEYDK LVNKWFGTGR EKVDLTTTQQ KMLWLAILVS IISAFGMILT AYISASLRKR
TLSLKSELVQ RRKAEQQILS LSQQFQSVLN GIPHGVTIFN RRCECLWSND KNNLLLKSPE
FHFTQGQVFQ LDDSLIEVLN EQKSLTADMS YHAQYWQLQI HPIAEDQAVI LLEETTEQQA
LRQANNEASR LASLGELSAG VAHEINNPTG LIIHSIAFLN HALCDLKPAA HHYTQQNPFW
SVAGLDPNQA IEELEISCAT IDEGANRISR IVSDLKCYAR PNIANKHRPM KLNEVVTVSL
RLTANQIKLF NLTTHLQLPE PELMGDAQQL QQVLINLIQN ACHASKPISD SIPSLITIET
YTRDSDHYLT ITDTGAGMDD ATLKRITEPF FTTRRSSGGT GLGLSVCSRI IKEHNAQMQI
NSRLGKGTKI SIRFPLITAI TKQMPEQQSE QERTVSLETE R
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