| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3776 |
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| Symbol | |
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| ID | 6118125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4601517 |
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| End bp | 4603307 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641635339 |
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| Product | flavocytochrome c |
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| Protein accession | YP_001762130 |
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| Protein GI | 170728104 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00235124 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGC TAAAAAGTGC CATCTACTTG GCAACGCTAT TGGGAACTGC TGGTCTAGTT
GCAAACGCAA CTGCGGCAGA CAACCTTGCT GACTTCCATG CTGAAAACCA AGAGTGTGAT
TCTTGTCATA CAGCTGATGG TGAGTTATCT AACGATAACC TTAGCTATGA AAATGCCCAG
TGTGTTTCCT GTCACGGCTC CATGGCGGAG GTAGCACAAG AGACCAAACA TGAACATTAC
AATGCTCATG ATTCTCACTT CCCTGGCGAA GTTGCTTGTA CCTCTTGTCA CAGTGCTCAT
GAAAAATCTA TGGTCTACTG TGACTCTTGC CACAGCTTTG ATTTCGATAT GCCTTATGTG
GGCAAGTGGG AACGTCATGA GCCAAGTATC GCTGAACTTG CAAAAGATAA ATCAGAGCGT
GAAGCAGCAT TAGCCGCCGC GCCGCGAGAT ACTGTTGATG TGGTCGTTGT TGGCTCTGGC
GGAGCTGGCT TCTCTGCATC TGTTGCCGCT CACGATAAGG GCGCGTCTGT CATCCTTATT
GAGAAGGAGC CTGTTATCGG TGGTAACGCT AAGTTAGCTG CTGGTGGCAT GAACGCCGCT
TGGACGGATC AACAAAAAGC CAAGGGCATT GAAGACAGTG TTGATTCGAT GAGAAAAGAC
ACCATGAAAG GGGGCCGCGA GCTTAACGAT CCTGCTTTAG TTGATGTGTT AGTGACTCAC
TCTAAAGGCT CTGTGGATTG GATGACCGCC ATGGGTGCCG ATCTTAATGA TGTTGGCCGT
ATGGGCGGCG CATCTGCTAA CCGCTCTCAC CGTCCAACGG GGGGCGCAGG TGTTGGTGCT
CATGTGATTC AGGTGCTTTA CGATAACGCG ATTAAGCGTG ATATCGATAT GCGCATGAAT
ACCCGCGGCA TTGAGATCCT TAAAGATGAC TCAGGTAAGG TTAAAGGCCT ACTCGTTAAA
GGTATGTACA AGGGCTATTA CTGGATTAAG GCCGATGCAG TGATTTTGGC AACCGGTGGC
TTTGCGAAGA ATAATGACCG CGTCTCTAAG TTAGATCCTA AGCTTAAAGG CTTTATCTCA
ACGAACCAAC CAGGTGCAAC AGGTGATGGT ATCGATGTGG CAGCTAATGC TGGCGCCGCG
ATGCAAGACC TTCAATATAT TCAAGCTCAC CCAACGCTAT CAGTTAAAGG TGGTGTGATG
GTCACTGAAG CGGTACGTGG GAATGGCGCT ATCTTGGTAA ACCGTGAAGG TAAGCGATTC
GTTAATGAGA TCACCACGCG TGATAAAGCT TCTGCCGCGA TTCTTGAGCA AACTGGTAAG
TCTGCTTACC TGATTTTCGA TGACTCAGTG CGTAAATCAC TGAAGAAAAT TGATAAGTAT
ATCGGTCTTG GTGTAGTACC AACGGCTGAC ACATTAGTGA ACTTAGGTAA ACTTGAGAAC
ATCGATGGTA AAGCTTTGAC CGAAACCGTT GCTCGTTACA ACACCTTAGT GACCAGTGGT
AAAGATACTG ACTTTGGACG TCCTAACTTG CCTCGTGCAC TTAATGAAGG TAACTACTAC
GCCATTGAAG TGACACCTGG TGTTCATCAC ACCATGGGCG GCGTTAAGAT TGACTCTAAA
GCTGAGATCA TGAATGCCAA GCAGCAAGTG ATCCCAGGTC TTTATGGCGC GGGTGAAGTG
ACTGGCGGTG TTCACGGTGC CAATCGTCTG GGTGGTAATG CTATCTCTGA TATCATCACC
TTCGGTCGAG TGGCAGGTGA AGAAGCAGCG ACTTATTCTA AGAAGAATTA G
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| Protein sequence | MKKLKSAIYL ATLLGTAGLV ANATAADNLA DFHAENQECD SCHTADGELS NDNLSYENAQ
CVSCHGSMAE VAQETKHEHY NAHDSHFPGE VACTSCHSAH EKSMVYCDSC HSFDFDMPYV
GKWERHEPSI AELAKDKSER EAALAAAPRD TVDVVVVGSG GAGFSASVAA HDKGASVILI
EKEPVIGGNA KLAAGGMNAA WTDQQKAKGI EDSVDSMRKD TMKGGRELND PALVDVLVTH
SKGSVDWMTA MGADLNDVGR MGGASANRSH RPTGGAGVGA HVIQVLYDNA IKRDIDMRMN
TRGIEILKDD SGKVKGLLVK GMYKGYYWIK ADAVILATGG FAKNNDRVSK LDPKLKGFIS
TNQPGATGDG IDVAANAGAA MQDLQYIQAH PTLSVKGGVM VTEAVRGNGA ILVNREGKRF
VNEITTRDKA SAAILEQTGK SAYLIFDDSV RKSLKKIDKY IGLGVVPTAD TLVNLGKLEN
IDGKALTETV ARYNTLVTSG KDTDFGRPNL PRALNEGNYY AIEVTPGVHH TMGGVKIDSK
AEIMNAKQQV IPGLYGAGEV TGGVHGANRL GGNAISDIIT FGRVAGEEAA TYSKKN
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