| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3767 |
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| Symbol | |
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| ID | 6118116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4582897 |
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| End bp | 4586832 |
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| Gene Length | 3936 bp |
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| Protein Length | 1311 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641635330 |
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| Product | protease domain-containing protein |
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| Protein accession | YP_001762121 |
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| Protein GI | 170728095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000363962 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACTTTA ATAAAACAGT GATAGCCACC GTTATTGGCA CTGCGCTAGC AGGCGTCACA
TTAAGTGCGA CAAGTGGTGA TTTAAAAGCA GCTCCAAATT ATAAATCATT TGATAATGCT
CAAGTTATAA AAAAACAAAA CCAACAAATC AATGTAGCTA CAGCGAGTGG AATGAGTAAT
CAATATGATG CTCAATTAGG TAAAACGACT TTTAGATGGG CGGGTAAAAG CCAGTCTGTT
CCAAGCTTAG GGGCTGTCTC GTTAGAGAAT AAAGTTTCCC ATGCTGCAGA TTATTATCTA
GGAAAATTAA CAGGATTCTC ATCATCTAAA GGCGGTGTTG CTCAATCTGT TTTGGTTAAT
ACTCATGATT TAGGCCGTGG CTCAATTATT GCGAAATACA AGCAAGAAGT ATCTGGTGTA
GAAGTCTTTA ATCGTGAGTT TAATATCATG ATGGACAGGG AGTTTAATCT GGTTGCGTCA
TCTGGTTATT TTGCTTCCCA AAGAGCGGCT ACAACTGTTA CTTCAGCAAT TAAAGATATC
GAAGGTGCAT TTGGAGATGC ATCTGAGTCG ATAAGTGCAG CATTTGGTGC TATGGGGGGA
GATAAGAACT CTGTAACACT CAGTGCCAAG CCTTTAAACG GTAAGTATGA AAAGTTTGCT
GTTACAAATA TGGCTACGGA TAAAATCCTG GTCGGTGAGC CTAGAGCTAA AAAAGTTTTC
TTCGAGCATA AAAATAAACT GGTTGCAGCG CATTATGTTG AAATTGAAAC GGGTGCCAGT
GATAGCCGTG AATCGGAATA TTTCAGCTAC GTTATCTCTG CAAAAACTGG TGAAATTTTA
TTTAAGAAGA ATCTAACAAG TCACGCAGCT GATTTTAATT ATCGTATATA TGCTGATGAA
GATGGTAAAC CATGGGATAG CCCTCACGGT AATGTTATGC CAGCCCCCGA AGGAAGTGAT
GTTGATGCTT ACTTAACTGC CCCTTACTTA GATGCACCTA TGGTAGCGTT AACTCATGGG
CCAATTAGTA CCATGGATCC TTGGTTAGCT GATGATGCAA CTTCGACTAT GGGTAATAAT
GTGACAGCAT ATGTTGACGC TATTGCACCA CAGGGATTAA CTAATGGTGA TTATCTAGCT
GAAACAACCA GCAGTAATAC TTTTGATTAC AAATATGATG ATAGTGAGGC TGAGTACTCT
GTAAATAATC GTAAGGCTGC GATTGTTAAC TTGTTCCTGA TGAATAACTA TCTGCATGAT
GATTATTATG ATCATGGTTT CGATGAAGCT GCCGGTAATG CGCAAACACT AAACTATGAT
CGTGGTGGTG TAGAAGGCGA TGCCCTTAAT GTTGAAGTTC AAGATAACTC AGGCTTTAAC
AATGCGAACA TGAGTACACC GGCCGACGGT GGCTCACCAC GTATGCAGAT GTATTTATGG
GAAACGACTC AAGCGGTAAA TGGTGTTGAT TTTGGCGTAA CTGCGACATC TCATGCATCA
ATTGGTATGT TAGAAGATTT AGGTTTTGCA GGCTTCGGGC CTGATGTATT TGAGGTTTCT
GGTGATTTAG TTCGACTTGT AGATGCTACC GACCCTGTTA ACGATGGGTG TGAGGCTGCG
ACAAATGCTG CTGAACTTGC TGGTAAGATT GCAATCATTG ACCGAGGTGC TTGTAACTTT
ACTCAAAAGG TTAAGAATGC CCAAGATGCA GGCTCTATTG CAGTGATTAT TGCTAATAAT
AGGGATGGTG ATGCAACAAT AACCATGGGG GGAAGTGATG ACACTATCAC TATCCCAAGC
ATGATGGTTT CTCAAAATGA AGGTGCTGCA ATTTATGCAC TCTTAGATGC GGATGAAACT
GTCACTGTAG ATATGTTCAA AAATGATTTA TCGAGAGTAT TTAAAGATAG TTCATGGGAT
AACGCCATTG TTGCTCATGA GTGGGGCCAC TACATCAGTA ACCGTTTAGT AGGTAATGGT
TCAGGGCTTA GTAGTAACCA GGCTCGTTCA ATGGGTGAAG GCTTTGGTGA CTTCCATGCT
TTACTCTTTG GTTCTGAAGA GGCGGATAAT TTAGTTACTG GTAATGAAAA CTATGCTGGA
AGCTATGGTG ATACCACCTA TGTTGCTAGT TTTGTTAATG GTATTCGCCA ATTCCCATAC
TCTACTAATA TGGATATTAA TCCGTCGACA TTTGCTTATG TTGAAAGTAA CCCTCAAGTA
CATGCCTCTG GTTCGGTTTA CGGAGTTATG CTATGGGATG CGTTTATTGG CTTAGTTAAT
GATGAACGTC ATACGTTTGA TGAAGCTAAA GACTTAATGA AAGATTATCT TGTTGCTGGT
TATAAGATGA TGCCTATGGC TCCAACTTTT ACTGAAGGTC GAGATGCGTT ATTAGCGGCA
GCGTACGCAA ATGATGAAGA TGATTATAAA GTTATTCTTG GCGCATTTGC ACGTCGTGGT
ATGGGGCTAG GTGCAAAATC ACCGAGTCGC TTCTCAACAG ATCATGCAGA TGTTGTTGAG
TCATATAAAA CTGATTTAGC GACTTATACG GTGGCAGAGC ATGAGTTAGA TACTAATTAT
GAAGGTATGA CAGTTGGTTA CTGCTCAAGT GATAACATTC TAGATAAAGG CGAAACAGGT
ACTGTTAGCT TCACCATTCA AAATGGTGGT AATCAAGCGT TAACCGGCCT AACTGGCGAA
ATTGTTGTGG AAAGCGATCA TGATGTTACT TTTGCCAATG ACGGTATGGT TACATTCGAT
GATGTTGCTC TGTTTGGTTC AACGACTAGC TCCCCAATTG AATTTACACT TAATGAAGCT
GCTACTGGTG ATGAATTAGT ACTTAAATTT GTGCCAGAAC TTGCTGAAGG TATGGAAGCC
GATGAATATA TGCTTTCTAC AATAGTTAAT GTGGACTTTG AAACTCGTGA GTTAGTTGGA
AGCACTCAGT ATGAGGATTT AAATACGCTC TCTAGACTGA ATGACTTCAC AGAAACAGTT
ATTGTTGGCG GTGAAATGGC CAAGGGAACA TTTGGTCTAG ATCAATGGGA TGACACTGAT
GGGTTGATCT CTGGAACTGG TAATAGCTTT ACATCAGATG TCGGGTACGA AACACGCCCA
ACATCTGTTG GCTTCGATGG AGAGTTTACA GTTAGCTTCT GGCATCTATA TAATCTAGAA
ACGGGTTATG ATGGAGCAGT TGTTGAGGTT AGTGTGAATG GTGGTGACTG GGTTGATGTT
ACCGACATGG GGGCGACTTT TGCAGGTGAT GGTTATACTG ACACTGGCCT TGATAACACG
GAAGCGGCTA TTGCTGGTCG CTCTACATTC TCAGGGTTCA ATTACGGTGC TGAAACCATT
AATTTTGGTG AGAGTTTAAA TGGTAATCAG GTTCAATTCC GTTTCCGTAT TGCGACAGAT
TCAGCAGTAG TACCTGATCC AGTGTCTGGT TTTGCTTCAG GTTGGTATAT TGATGACATT
ACCTTCACCA ATACACAGAC AAGCTTATTT TCTGATGTTG TTGCTGGTGA CACCTTTGCA
TGTGATAACC GCTTACCTAG TGTGACTACA AGTGCCAGTG CTGAAAGTGT AAACGAAGGT
CAAGCTGTAA CATTAACTTC TGTGACAGTC GATCCAAATG CTAATGATAC CCACACATAT
GCATGGACAC AGACATCAGG AACTTCTGCC ACATTAACTG GTGCCGATAC AAGTCAGGTG
AGCTTTACGG CTCCTGACGT CAGTGGTGAT GAAACTCTAG AGTTTTCTGT AACCGTAAAT
GATGGAACTG GAGATGTTGT CTCTACAGTC AGCGTTCAGG TGAAGGATAT ACCAGAGGTT
GTACCACCAA AAGAGCCTTT AGCTAAAGGT TCAGGTGGTT CTACAGGTCT ACTTACTCTG
TTATTACTAC CGTTGGCGCT TCTTCGTCGT AAGTAA
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| Protein sequence | MNFNKTVIAT VIGTALAGVT LSATSGDLKA APNYKSFDNA QVIKKQNQQI NVATASGMSN
QYDAQLGKTT FRWAGKSQSV PSLGAVSLEN KVSHAADYYL GKLTGFSSSK GGVAQSVLVN
THDLGRGSII AKYKQEVSGV EVFNREFNIM MDREFNLVAS SGYFASQRAA TTVTSAIKDI
EGAFGDASES ISAAFGAMGG DKNSVTLSAK PLNGKYEKFA VTNMATDKIL VGEPRAKKVF
FEHKNKLVAA HYVEIETGAS DSRESEYFSY VISAKTGEIL FKKNLTSHAA DFNYRIYADE
DGKPWDSPHG NVMPAPEGSD VDAYLTAPYL DAPMVALTHG PISTMDPWLA DDATSTMGNN
VTAYVDAIAP QGLTNGDYLA ETTSSNTFDY KYDDSEAEYS VNNRKAAIVN LFLMNNYLHD
DYYDHGFDEA AGNAQTLNYD RGGVEGDALN VEVQDNSGFN NANMSTPADG GSPRMQMYLW
ETTQAVNGVD FGVTATSHAS IGMLEDLGFA GFGPDVFEVS GDLVRLVDAT DPVNDGCEAA
TNAAELAGKI AIIDRGACNF TQKVKNAQDA GSIAVIIANN RDGDATITMG GSDDTITIPS
MMVSQNEGAA IYALLDADET VTVDMFKNDL SRVFKDSSWD NAIVAHEWGH YISNRLVGNG
SGLSSNQARS MGEGFGDFHA LLFGSEEADN LVTGNENYAG SYGDTTYVAS FVNGIRQFPY
STNMDINPST FAYVESNPQV HASGSVYGVM LWDAFIGLVN DERHTFDEAK DLMKDYLVAG
YKMMPMAPTF TEGRDALLAA AYANDEDDYK VILGAFARRG MGLGAKSPSR FSTDHADVVE
SYKTDLATYT VAEHELDTNY EGMTVGYCSS DNILDKGETG TVSFTIQNGG NQALTGLTGE
IVVESDHDVT FANDGMVTFD DVALFGSTTS SPIEFTLNEA ATGDELVLKF VPELAEGMEA
DEYMLSTIVN VDFETRELVG STQYEDLNTL SRLNDFTETV IVGGEMAKGT FGLDQWDDTD
GLISGTGNSF TSDVGYETRP TSVGFDGEFT VSFWHLYNLE TGYDGAVVEV SVNGGDWVDV
TDMGATFAGD GYTDTGLDNT EAAIAGRSTF SGFNYGAETI NFGESLNGNQ VQFRFRIATD
SAVVPDPVSG FASGWYIDDI TFTNTQTSLF SDVVAGDTFA CDNRLPSVTT SASAESVNEG
QAVTLTSVTV DPNANDTHTY AWTQTSGTSA TLTGADTSQV SFTAPDVSGD ETLEFSVTVN
DGTGDVVSTV SVQVKDIPEV VPPKEPLAKG SGGSTGLLTL LLLPLALLRR K
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