| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3755 |
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| Symbol | |
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| ID | 6118104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4568930 |
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| End bp | 4569889 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641635318 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001762109 |
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| Protein GI | 170728083 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.111222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTATATTA ACATTCAATT AAGATTAATA ACCTCAATTT ATAAAGACTA TTTCCATATG
ACTATGAATA AGCTGTTTGA TGGCGTAGTG ATCTTCACCC AAGTGGTCAA AAGTGGTGGC
TTTTCTGCGG CGGCTGAAGC CTTAGGCCAT TCCACCTCTT ACGTCAGCAA AGAGGTGAAC
AAGCTTGAAA GTCGCCTAGG GGTAAGACTG CTTAACCGAA CAACACGCTC TATTGGATTA
ACCCCAGAGG GACAAGCCTA CCATCAGCAA TGCCTTCAAC TTGTTCAGGA CGCAGAACAA
GCGGTTCAAC TCATCACTCA ACATGATGTC AGCCCAAAGG GGCACTTAAA AATCAGCAGT
CCAGTGGGGT TTGCCAATAA CTATCTGCGG CCTATATTGA GCCAATATAT GCTGAATTAT
CCTAATGTAA ATTTAGAGTT AGATCTTAAT GATCGCCGTG TCGATGTGAT AAGCGAAGGC
TATGACTTAG TGATTCGAGC ATCACAGAAC TTAGATGAAT CTAGCTTAAT CTGCCGTAAA
ATATACTCTT GCAAAGCCTA CACAGTAGCA ACGCCAGAAT ACCTTTCCAA ACATGGACGC
CCCTATCACC CTCAGGAGTT AGCTAAACAT AACTGCCTTT GTTACTCCAA CCTAAAACTA
CCCACGCGTT GGCACTATAG CGACAAGCAA GGTAAGAGCT TTTTCGTCGA TGTTAGACAA
AAAGTTCTTT GTAATAGCGG TGAGATGGAG TTTGCAATGA CCTTAGATGG TTTAGGGATC
TGCCGCTTAC CTGAGTTCTA TCTGCAAGAT ACCCTAGAGA CAGGCAAGCT TGAGATCCTC
TTTCCCCAGT ATCCAACGAC AGACATAGAT GTGTTTGTGG TTTACCCAAG TCGTAAGCAC
CTATCACCTA AGGTCAGGGC CTTTATCGAT TTGGTCGTCG AGCGACTTCC AAACCGATGA
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| Protein sequence | MYINIQLRLI TSIYKDYFHM TMNKLFDGVV IFTQVVKSGG FSAAAEALGH STSYVSKEVN
KLESRLGVRL LNRTTRSIGL TPEGQAYHQQ CLQLVQDAEQ AVQLITQHDV SPKGHLKISS
PVGFANNYLR PILSQYMLNY PNVNLELDLN DRRVDVISEG YDLVIRASQN LDESSLICRK
IYSCKAYTVA TPEYLSKHGR PYHPQELAKH NCLCYSNLKL PTRWHYSDKQ GKSFFVDVRQ
KVLCNSGEME FAMTLDGLGI CRLPEFYLQD TLETGKLEIL FPQYPTTDID VFVVYPSRKH
LSPKVRAFID LVVERLPNR
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