Gene Swoo_3738 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3738 
Symbol 
ID6118087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4551896 
End bp4553110 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content42% 
IMG OID641635301 
ProductTonB family protein 
Protein accessionYP_001762092 
Protein GI170728066 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAATT GGTTAATGGA GCAAACCATA CTCATCAGCT TAATCTGTGC CATTTTATTA 
GTCGGTCACA AACAGATTTT GAAACTCTTC GGTGCCCACC ACACCTATGC ACTCTGGCTA
GCCATTCCAA TGCTGCTACT TGGCTCTGCC ATCATACATC TAGTGCCAAA CTTGCTATCT
AACTCTCGCA TCACACAACT TGAACACTAT CGGGTACTAG CAGATAGAAC ATTAGCCGAC
AGTGAACTGT TTTTATCCAC TCCCACTCTA TTAGCAATCT GGACTCTTGG GTTCGCTTTC
ATGTTAATGA CCATTGCCGT TCATGCTGTC AGGCTAAAAC AGCTAATCAA CCATTGCTCT
GCGTTTACTA GCATAGAGAC TCATCTGACC GTTATTCAAC ATCAGAATAT TCACTCCCCT
ATGCTAGTGG GACTACGTAA ACCAAAAATC ATCGTTCCCT ATGGATTTGA ACAACTCAGT
ATCGCCCAAC AAACCGCCGT GATTGAACAT GAACTGTATC ACCATCGCCG AGGGGATATC
GGTATGAATC TTATCGCCTT CTCTCTGCTC AGTATTTTCT GGTTTAACCC TATCTGTTGG
CTCGCATACC GACGTTTTCG CGATGATCAA GAGTTAGCTT GTGATGCTCA AATAACCACA
TCTATGAATA CAGATGAAAA GATTGCCTAT AGCCGAGCCT TGCTCACATA CTCCCAGCAA
GCTCACATCG GCATGTTACA CACCCACTAT GGAAATAAAA ATATACTAAA AGAGAGGATA
TTACAGATGA AAAAACAACA TGAAAAAAGC ACACTCGCAA TTATTGGGCT TACACTAGGT
TTAGGCTTTA GCGGCTTAAT GCTGAATCAA CAAGTCCAAG CTGGTGATAA TCATGACTCT
ACTCATGCTG CAAAAAAACA GCAAATCTAT CCATTAACAC GTGTAGAACC TAAATACCCA
AAGGCCGCGA TTGAAGCAAA ACAAAATGGC TTTGTGCAGC TTGAGTTTGA TATCAAAAAA
TCTGGTGCTG TAGCAAATGT CTCTGTGATC AAATCCTCAC CTAAAGACGT ATTCGACAAG
CAGGCGGTTA AAGCGCTTAA GCAGTGGACC TACAAAAAGT CTAAGCAAGG TGCTAAAGGT
GTTCAGGTGC AGTTAGATTT TGTTATTGAT GAACCCGCAG CAGATGTTGA ACGTATAAAA
GTGACCGCAA AATAA
 
Protein sequence
MLNWLMEQTI LISLICAILL VGHKQILKLF GAHHTYALWL AIPMLLLGSA IIHLVPNLLS 
NSRITQLEHY RVLADRTLAD SELFLSTPTL LAIWTLGFAF MLMTIAVHAV RLKQLINHCS
AFTSIETHLT VIQHQNIHSP MLVGLRKPKI IVPYGFEQLS IAQQTAVIEH ELYHHRRGDI
GMNLIAFSLL SIFWFNPICW LAYRRFRDDQ ELACDAQITT SMNTDEKIAY SRALLTYSQQ
AHIGMLHTHY GNKNILKERI LQMKKQHEKS TLAIIGLTLG LGFSGLMLNQ QVQAGDNHDS
THAAKKQQIY PLTRVEPKYP KAAIEAKQNG FVQLEFDIKK SGAVANVSVI KSSPKDVFDK
QAVKALKQWT YKKSKQGAKG VQVQLDFVID EPAADVERIK VTAK