Gene Swoo_3715 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3715 
Symbol 
ID6118059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4520946 
End bp4521911 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content47% 
IMG OID641635274 
Productlipoyl synthase 
Protein accessionYP_001762070 
Protein GI170728044 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0320] Lipoate synthase 
TIGRFAM ID[TIGR00510] lipoate synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00165797 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00474747 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTAGGC CAGAAAGATT ACAACCAGGT GTCAAACTTA GAGATGCAGA TAAAGTATCG 
CGCATCCCAG TTAAAGTCGT GCCCTCCGAA CGCGAAACCA TGTTACGAAA GCCTGACTGG
TTAAGGGTAA AACTCCCCTC TTCAAGCCAA CGTATTGATG AGATTAAGCA GGCTTTAAGA
AGCAATGGCC TACATTCAGT GTGTGAAGAG GCATCATGCC CTAACCTAGC AGAATGTTTT
AACCATGGCA CAGCGACCTT CATGATCTTA GGTGCTATCT GTACCCGTCG CTGCCCCTTC
TGCGATGTTG CCCATGGGCG ACCATTAAAA CCTGATGCGC AGGAGCCTAA AAAGCTAGCG
CAAACAATCA AAGATATGAA GCTAAAGTAT GTCGTGATCA CCTCTGTCGA TCGTGACGAC
CTTCGTGATG GTGGTGCCCA GCACTTTGCC GATTGTATTC GTGAGATCCG CTTATTAAAT
CCTGAAATAA AGATTGAGAC CTTAGTTCCG GATTTCCGTG GTCGCATCGA TGCCGCACTC
GACATCTTAG CCACAGAGCC ACCTGATGTC TTTAACCACA ATTTAGAAAC AGCGCCAATG
CACTATCGTA AGGCCCGTCC TGGTGCAAAT TACCAATGGT CACTGGATCT GCTTAAGAAG
TTTAAAGAGC GTCACCCCGA TGTACCTACT AAGTCAGGTC TGATGATGGG ATTAGGTGAA
ACCAACGAAG AGATAGCACA GGTATTAAAA GATCTGCGCG CTCATAACGT TGAGATGCTC
ACTCTAGGCC AGTACCTTCA GCCTTCTAAG TTCCACCTGC CTGTTGAGCG TTATGTGCCG
CCAGCAGAGT TTGATGAATT ACGAGTGTTT GCAGAGGAGA TTGGTTTTAC CCATGCAGCA
TGCGGCCCTA TGGTTCGCTC AAGCTACCAT GCAGATCTTC AGGCTCAAGG TAAAGAAGTG
AAATAA
 
Protein sequence
MSRPERLQPG VKLRDADKVS RIPVKVVPSE RETMLRKPDW LRVKLPSSSQ RIDEIKQALR 
SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAQEPKKLA
QTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRLLN PEIKIETLVP DFRGRIDAAL
DILATEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKK FKERHPDVPT KSGLMMGLGE
TNEEIAQVLK DLRAHNVEML TLGQYLQPSK FHLPVERYVP PAEFDELRVF AEEIGFTHAA
CGPMVRSSYH ADLQAQGKEV K