Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3715 |
Symbol | |
ID | 6118059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4520946 |
End bp | 4521911 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635274 |
Product | lipoyl synthase |
Protein accession | YP_001762070 |
Protein GI | 170728044 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0320] Lipoate synthase |
TIGRFAM ID | [TIGR00510] lipoate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00165797 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00474747 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAGGC CAGAAAGATT ACAACCAGGT GTCAAACTTA GAGATGCAGA TAAAGTATCG CGCATCCCAG TTAAAGTCGT GCCCTCCGAA CGCGAAACCA TGTTACGAAA GCCTGACTGG TTAAGGGTAA AACTCCCCTC TTCAAGCCAA CGTATTGATG AGATTAAGCA GGCTTTAAGA AGCAATGGCC TACATTCAGT GTGTGAAGAG GCATCATGCC CTAACCTAGC AGAATGTTTT AACCATGGCA CAGCGACCTT CATGATCTTA GGTGCTATCT GTACCCGTCG CTGCCCCTTC TGCGATGTTG CCCATGGGCG ACCATTAAAA CCTGATGCGC AGGAGCCTAA AAAGCTAGCG CAAACAATCA AAGATATGAA GCTAAAGTAT GTCGTGATCA CCTCTGTCGA TCGTGACGAC CTTCGTGATG GTGGTGCCCA GCACTTTGCC GATTGTATTC GTGAGATCCG CTTATTAAAT CCTGAAATAA AGATTGAGAC CTTAGTTCCG GATTTCCGTG GTCGCATCGA TGCCGCACTC GACATCTTAG CCACAGAGCC ACCTGATGTC TTTAACCACA ATTTAGAAAC AGCGCCAATG CACTATCGTA AGGCCCGTCC TGGTGCAAAT TACCAATGGT CACTGGATCT GCTTAAGAAG TTTAAAGAGC GTCACCCCGA TGTACCTACT AAGTCAGGTC TGATGATGGG ATTAGGTGAA ACCAACGAAG AGATAGCACA GGTATTAAAA GATCTGCGCG CTCATAACGT TGAGATGCTC ACTCTAGGCC AGTACCTTCA GCCTTCTAAG TTCCACCTGC CTGTTGAGCG TTATGTGCCG CCAGCAGAGT TTGATGAATT ACGAGTGTTT GCAGAGGAGA TTGGTTTTAC CCATGCAGCA TGCGGCCCTA TGGTTCGCTC AAGCTACCAT GCAGATCTTC AGGCTCAAGG TAAAGAAGTG AAATAA
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Protein sequence | MSRPERLQPG VKLRDADKVS RIPVKVVPSE RETMLRKPDW LRVKLPSSSQ RIDEIKQALR SNGLHSVCEE ASCPNLAECF NHGTATFMIL GAICTRRCPF CDVAHGRPLK PDAQEPKKLA QTIKDMKLKY VVITSVDRDD LRDGGAQHFA DCIREIRLLN PEIKIETLVP DFRGRIDAAL DILATEPPDV FNHNLETAPM HYRKARPGAN YQWSLDLLKK FKERHPDVPT KSGLMMGLGE TNEEIAQVLK DLRAHNVEML TLGQYLQPSK FHLPVERYVP PAEFDELRVF AEEIGFTHAA CGPMVRSSYH ADLQAQGKEV K
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