| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3714 |
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| Symbol | lipB |
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| ID | 6118058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4520294 |
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| End bp | 4520953 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635273 |
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| Product | lipoate-protein ligase B |
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| Protein accession | YP_001762069 |
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| Protein GI | 170728043 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0321] Lipoate-protein ligase B |
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| TIGRFAM ID | [TIGR00214] lipoate-protein ligase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000923711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00434688 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | TTGTCAGAGA GCACGTTGCA CGTAAGGTAT CTTGGTCAAC AAGATTACGA GTCTGTATGG
CACGCGATGC AGGAATACAC AGATAATCGA GATAGTTCCA GTCCAGATCA ACTCTGGATA
GTTGAACATC CTCCTGTGTT TACCCAAGGT CAGGCAGGGA AAAGTGAACA TATCTTAAAC
CCCGGTGATA TTCCTGTCAT TCAGGTAGAC CGAGGAGGTC AAGTCACGTA TCACGGACCT
GGCCAGCTTG TGGCTTACCC TCTTATCAAT ATTAAGCGGC TTAAAATCGG TGTTCGCCAA
CTGGTCACCG ATATCGAAAA TAGCATAGTG CAGATGCTTG AAAACTATCA AGTCAAAGCC
TATGCAAAAG CTGATGCACC TGGCGTTTAT GTCGATGAAC GCAAAGTCGC ATCATTAGGA
CTAAGGATCC GTAAGGGCTG CTCCTTTCAT GGTTTAGCGC TTAATGTCGA TATGGATATG
AGCCCATTCC AGCGAATTAA CCCATGTGGT TATGCTGGTT TAGAAATGGT GCAATGCAAA
CAATTAGGCG GACCTCAAAC TGTCGAAGAG GCAGGCGAGC AGCTCGTTAA AACATTTAGC
CACAACTTAG GCTATCAGAA TCTAGTTCAT CATCAAGGAT TGTCACAGTC ATATGAGTAG
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| Protein sequence | MSESTLHVRY LGQQDYESVW HAMQEYTDNR DSSSPDQLWI VEHPPVFTQG QAGKSEHILN
PGDIPVIQVD RGGQVTYHGP GQLVAYPLIN IKRLKIGVRQ LVTDIENSIV QMLENYQVKA
YAKADAPGVY VDERKVASLG LRIRKGCSFH GLALNVDMDM SPFQRINPCG YAGLEMVQCK
QLGGPQTVEE AGEQLVKTFS HNLGYQNLVH HQGLSQSYE
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