Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3702 |
Symbol | leuS |
ID | 6118046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 4507639 |
End bp | 4510218 |
Gene Length | 2580 bp |
Protein Length | 859 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641635261 |
Product | leucyl-tRNA synthetase |
Protein accession | YP_001762057 |
Protein GI | 170728031 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0495] Leucyl-tRNA synthetase |
TIGRFAM ID | [TIGR00396] leucyl-tRNA synthetase, eubacterial and mitochondrial family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.031134 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000516313 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCAAGAGC AATATCAACC TTCAGAAATT GAAGCTAAGG TGCAGCAGCA CTGGCAAGAC ACGAAAACAT TTGAAGTCAC CGAAGATGAG AATAAGGAGA AGTTTTACTG CCTCTCTATG TTCCCATACC CGTCGGGCCG TCTACACATG GGTCATGTTC GTAACTACAC CATAGGTGAC GTTGTTGCCC GTTACCAGCG TTTGCAGGGA AAAAATGTCC TTCAGCCTAT CGGTTGGGAC TCTTTCGGCC TGCCAGCTGA GAATGCTGCG ATTAAAAACA GCAGTGCACC GGCACCTTGG ACTTATGAAA ATATCGATTA CATGAAAAAC CAGCTAAAAA TGCTGGGCTT TGGTTATGAC TGGAGCCGTG AAATCGCAAC TTGTACGCCA GAGTACTATC GTTGGGAACA GTGGTTCTTC ACTAAGCTTT ATGAGAAAGG TTTAGTTTAT AAGAAAACCG CCTCTGTAAA CTGGTGCCCG AACGATGAAA CGGTACTTGC CAACGAACAG GTACAAGATG GCTGTTGCTG GCGTTGTGAT ACTGAAGTGG TCCAGAAAGA GATCCCTCAG TGGTTCATTA AAATCACCGA CTACGCCGAT GAGCTTCTCA GTGATATCGA CCAGCTCGAT GAGTGGCCAG AGCAAGTTAA GACCATGCAG CGCAACTGGA TTGGCCGCAG TGAAGGCATT GAGATGACTT TCCAAGTTGC CGATAGCGAT GAGTCTTTCG ATATCTACAC TACCCGTCCT GATACTGTAA TGGGTGTGAC CTATGTTGCG ATAGCAGCAG GTCATCCTTT GGCAGAAAAA GCTGCGGCTA ACAGCCCTGA GCTAGCTGCA TTTATCGAAG AGTGCAAAAA CGCCGATACC ACCGAAGCTG CGATGGCAGC AATGGAGAAA AAAGGTGTCG CAACGGGTCT GTATGCCATC CACCCACTAA CGGGTAAGCA AGTACCTATC TGGGCTGCAA ACTTCGTGTT GATGAACTAT GGCACAGGCG CTGTGATGTC AGTACCAGCT CATGATCAAC GTGATTATGA GTTTGCGATT AAATATGGTT TAGCCATCGA GGGCGTCATT AAGCCTGAAG ATGCTGAGCT AGACATCAGT GAGGAAGCTT ACACAGAAAA AGGCGTACTA TTTAACTCAG CTGAGTTTGA TGGTCTGGAC TTCCAAGCAG CCTTCGATGC TATCGATGCC AAGCTTACTG CTGAAGGTAA AGGTAAACGT CAGGTCAACT TCCGTCTTCG TGACTGGGGT GTCTCACGTC AACGTTACTG GGGGGCACCA ATCCCTATGG TGACACTTGC CGATGGCACT GTAGTGCCTA CGCCTGAAGA TCAATTGCCA GTTATCTTGC CTGAAGATGT GGTGATGGAT GGGATCCAAA GCCCGATCAA GGCCGACAAA GAGTGGGCAA AAACCCAGAT CAATGGTGAA GACGCGCTAA GAGAAACTGA TACCTTCGAT ACCTTTATGG AATCTTCATG GTACTACGCA CGCTACTGTA GCCCGCACGC TGATGAGATG CTAGATCCAG CTAAAGCGAA CTACTGGTTA CCTGTTGATC AATACATAGG TGGTATCGAG CATGCTTGTA TGCACTTACT TTACTTCCGC TTCTTCCACA AGTTATTGCG TGATATAGGC TTAGTTAACT CAGATGAGCC AGCCAAACGT CTACTGACTC AAGGTATGGT ATTGGCAGAT GCTTATTACT ACACCAATGA GAAAGGTGCA CGTGTATGGG TCTCGCCAGC TGATGTCACA GTGCAGGAAA CTGACGATAA AGGCCGTACA GTTAAAGCAG TCGACAGTCA TGGTAATGAG CTTGTCTATA CCGGTATGAG TAAGATGTCT AAGTCTAAGA ACAACGGCAT CGATCCTCAA GAGATGGTCG ACAAGTACGG CGCTGATACT GTTCGTCTGT TTATGATGTT TGCAGCACCA CCAGAGTTAA CACTTGAGTG GCAAGAGTCG AGCGTAGAGG GAGCACACCG CTTTATTAAA CGTTTGTGGA AAGTCGCCCA CGATCATGTA GCGAAAGGGA CAACCGTATC ATTAGACGTT AAATCTCTCG ATGCTAAGCA GAAAGAGCTT CGCCGTGAGC TGCATAAGAC TATCGCTAAA GTCGGTGATG ATATTGAGCG TCGTCAGATG TTCAACACAG CTATCGCTTC AGTCATGGAG CTGATGAACC GTCTGCAAAA AGCACCTACT GAAACAGAGC AAGATAGAGC TCTGATGCAA GAAGCACTGT CAGCGGTTGT TCGCTTACTC TACCCTATCA TTCCTCACAC TAGCTTTAGT CTGTGGAAAG AACTTGGGAA CGAAGAGAAC ATCGAAGATG TTCGTTGGCC TGAAGCCGAT GAGTCAGCAT TAGTTGAAGA TAGCAAGCTG ATCATCGTTC AAGTAAACGG TAAGCTTCGC GCTAAGATCA CAGTGCCAGC TGATGCAACA AAAGAAGCTG TTGAAGCGCA AGGTTTTGCC GAGGAAGGTG TTATTAAGCA CACCGAAGGT AAGACGGTAC GCAAAGTGAT CTATGTACCT GGTAAGCTAC TTAATATCGT AGCGAACTAG
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Protein sequence | MQEQYQPSEI EAKVQQHWQD TKTFEVTEDE NKEKFYCLSM FPYPSGRLHM GHVRNYTIGD VVARYQRLQG KNVLQPIGWD SFGLPAENAA IKNSSAPAPW TYENIDYMKN QLKMLGFGYD WSREIATCTP EYYRWEQWFF TKLYEKGLVY KKTASVNWCP NDETVLANEQ VQDGCCWRCD TEVVQKEIPQ WFIKITDYAD ELLSDIDQLD EWPEQVKTMQ RNWIGRSEGI EMTFQVADSD ESFDIYTTRP DTVMGVTYVA IAAGHPLAEK AAANSPELAA FIEECKNADT TEAAMAAMEK KGVATGLYAI HPLTGKQVPI WAANFVLMNY GTGAVMSVPA HDQRDYEFAI KYGLAIEGVI KPEDAELDIS EEAYTEKGVL FNSAEFDGLD FQAAFDAIDA KLTAEGKGKR QVNFRLRDWG VSRQRYWGAP IPMVTLADGT VVPTPEDQLP VILPEDVVMD GIQSPIKADK EWAKTQINGE DALRETDTFD TFMESSWYYA RYCSPHADEM LDPAKANYWL PVDQYIGGIE HACMHLLYFR FFHKLLRDIG LVNSDEPAKR LLTQGMVLAD AYYYTNEKGA RVWVSPADVT VQETDDKGRT VKAVDSHGNE LVYTGMSKMS KSKNNGIDPQ EMVDKYGADT VRLFMMFAAP PELTLEWQES SVEGAHRFIK RLWKVAHDHV AKGTTVSLDV KSLDAKQKEL RRELHKTIAK VGDDIERRQM FNTAIASVME LMNRLQKAPT ETEQDRALMQ EALSAVVRLL YPIIPHTSFS LWKELGNEEN IEDVRWPEAD ESALVEDSKL IIVQVNGKLR AKITVPADAT KEAVEAQGFA EEGVIKHTEG KTVRKVIYVP GKLLNIVAN
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