Gene Swoo_3700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3700 
Symbollnt 
ID6118044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4505391 
End bp4506938 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content47% 
IMG OID641635259 
Productapolipoprotein N-acyltransferase 
Protein accessionYP_001762055 
Protein GI170728029 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0815] Apolipoprotein N-acyltransferase 
TIGRFAM ID[TIGR00546] apolipoprotein N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.582606 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.54581e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGAATA AACTTCGGGC ATCCGCCCAT CATTCAAAAA TACGTCTGGT GCTGGCATAC 
TTTGCCGGTG CCAGTACCAC ACTCGCTTTT GCTCCCTACT CGATATGGCC AATCTACTTA
GTCGCCATGG CATTTGCACT GCATTTAAGT CGCGCGCTAT CCGCCAAACA GAGCTTTAAC
TTTTGGCTCA GCTTTGGATT TGGTTGTTTT TCAGTTGGAA TAAGCTGGGT CCATGTCAGC
ATGGATAAAT TTGGCGGCCT GCCATTGATT GCCTCTATCG GACTAATGGC ACTATTAGCC
CTTTATCTGG CACTCTACCC CGCTCTAAGC GGCTACCTAC TGCAAAAACT GTCCCCTAAA
AATCCGCTCA CAAGAAATCT GCTGCTCTTC CCTATCCTAT GGACACTGAC CGAGTGGGCC
AGAGGCTGGG TGTTAACGGG ATTTCCTTGG TTATGGGCCG GATACTCCCA AACCGAAGGG
CCAATAAAGG AGCTCGCCAG TGTCATTGGT GTACTGGGAC TGAGCTACCT TATTGCTATG
CTCGCAGGTT CCTTAGCCCT ATGTCTGCAA AAACGCTGGC ACAGCGCCGC AATCATCTTG
CCGCTACTTA TCACTGCAAC TTACCTAAGC CCAATGCTCT CAAGCGTTGA AGCTAAAGGG
GAGTCGGTTA AGGTGACACT GGTACAAGGT AATATTGCCC AAAGCATGAA GTGGGAGCCC
GAGGCATTGT GGCCTACCAT GCTAAAATAC ATGGATCTCT CACGACCTGA GCTTGCAGAC
ACAGATATCT TTATCTGGCC AGAAGCTGCA ATTCCAGCTC CTGAGTCCAT GGTTGCTGAT
TTTCTGGATA ACGCCAATAA GGTCGCAAAT CTAAATAACA GCGCCATCAT CACAGGCATC
ATCAGCCAGC AGCAAGATAA TTTTTATAAT TCACTTATCG TGCTTGGAAA CCATGATAAG
CCAGAGCAAG AACAAGCCGA TTACACCATA GGCGGGGGCA ATGAGTTTAA AAAACACCAC
CTTCTACCTA TTGGTGAATT TGTTCCATTT GAATCGCTGC TCAGGCCGAT AGCCCCATTT
TTTAATCTGC CTATGTCTTC ATTTTCCAGA GGCGAATATC AACAACCAAA CTTAGAAGCA
GTCGGCCACC AGATAGCCCC AGCCATATGT TATGAGATAG CTTTTCCTGA ACTGTTAAGA
GCCAACGTTA ATGAAGATAC TGAGTTACTG CTCACAGTGT CCAATGATGC CTGGTTTGGT
AGCTCTAACG GTCCACTACA GCATATGGAG ATAGCCCAGA TGCGCTCCAT TGAGCTTGGT
CGTCCACTGG TCAGAGCCAC CAACACTGGC GTCACGGCTG TCGTGGATGA ATACGGCAAT
ATTACCCATA AGTTGCCGCA ATTTGAGGCT GGTGTATTAG TAGCTGATAT CCCCTTAGTG
AAAGGGAGCA CAGCATTTTC TAAATGGGGA GAGTGGCCAA TACTTCTCTG GTCATCATTG
CTACTTGTAC TGTTTCTATT TCGGTTTGTA AAACATCGCC TAGACTAA
 
Protein sequence
MLNKLRASAH HSKIRLVLAY FAGASTTLAF APYSIWPIYL VAMAFALHLS RALSAKQSFN 
FWLSFGFGCF SVGISWVHVS MDKFGGLPLI ASIGLMALLA LYLALYPALS GYLLQKLSPK
NPLTRNLLLF PILWTLTEWA RGWVLTGFPW LWAGYSQTEG PIKELASVIG VLGLSYLIAM
LAGSLALCLQ KRWHSAAIIL PLLITATYLS PMLSSVEAKG ESVKVTLVQG NIAQSMKWEP
EALWPTMLKY MDLSRPELAD TDIFIWPEAA IPAPESMVAD FLDNANKVAN LNNSAIITGI
ISQQQDNFYN SLIVLGNHDK PEQEQADYTI GGGNEFKKHH LLPIGEFVPF ESLLRPIAPF
FNLPMSSFSR GEYQQPNLEA VGHQIAPAIC YEIAFPELLR ANVNEDTELL LTVSNDAWFG
SSNGPLQHME IAQMRSIELG RPLVRATNTG VTAVVDEYGN ITHKLPQFEA GVLVADIPLV
KGSTAFSKWG EWPILLWSSL LLVLFLFRFV KHRLD