Gene Swoo_3692 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3692 
Symbol 
ID6118036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4497480 
End bp4498571 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID641635251 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001762047 
Protein GI170728021 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.68142e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.149729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTTA AATGTGGCAT TGTAGGCTTG CCAAACGTAG GTAAATCAAC ATTATTCAAT 
GCGTTAACTA AAGCGGGCAT CGAAGCGTCT AACTTCCCGT TTTGTACTAT TGAACCAAAT
ACTGGTGTTG TGCCTGTACC TGATGCTCGT TTGGATGCAT TAGCTCAGAT AGTTAACCCT
GAACGTGTGC TACCAACAAC TATGGAGTTT GTCGATATTG CAGGTCTAGT TGCTGGCGCT
TCTAAAGGTG AAGGTCTAGG AAACAAGTTC CTCGCTAACA TTCGTGAGAC GGATGCCATC
GGTCACGTTG TACGTTGTTT CGAAGATGAC AATATCGTTC ACGTTGCTAA TAAAGTTTCA
CCAGCTTCAG ATATTGAAGT GATTAACACT GAACTTGCAT TAGCGGATCT TGACTCTTGT
GAGCGTGCTA TCACTCGTCA GGCCAAACGT GCTAAAGGTG GCGACGCCGA TGCCAAGTTT
GAAGTTTCTG TACTTGAAAA GATGCGCCCA GTGCTTGATG AAGGTGACAT GCTGCGCTCT
ATGGAGCTAA GTAAAGAGGA GTTAGCTGCC GTTGCGTATC TGAACTTCCT GACGCTTAAG
CCTACTATGT ATATTGCTAA CGTTGCCGAA GATGGGTTTG AAAACAATCC ACATTTAGAT
ACCGTTCGTG AAATTGCTGC TAAAGAGAAT GCTGTTGTTG TTGCTGTTTG TGCTGCGATC
GAGTCTGAGC TTGCAGAGAT GGATGCAGAG GACCGCGAAG AGTTTATGGC TGATCTTGGT
TTGGAAGAGC CAGGCTTAGA TCGTGTTATT CGTGCCGGTT ACGACCTATT GACGCTGCAA
ACTTACTTTA CCGCTGGTGT TAAAGAGGTG CGTGCTTGGA CTGTTCCTGT TGGCGCGAGT
GCACCAAAAG CTGCTGGTGT TATCCATACC GATTTTGAGC GTGGCTTCAT TCGTGCTCAA
GTGATGGCTT ACGATGACTT CATTACTTAT AAAGGTGAAG CTGGCGCTAA GGAAGCGGGT
AAGTTAAGAG TTGAAGGTAA AACTTACATC GTTAAAGATG GCGATGTTAT GCATTTCCTA
TTTAACGTAT AG
 
Protein sequence
MGFKCGIVGL PNVGKSTLFN ALTKAGIEAS NFPFCTIEPN TGVVPVPDAR LDALAQIVNP 
ERVLPTTMEF VDIAGLVAGA SKGEGLGNKF LANIRETDAI GHVVRCFEDD NIVHVANKVS
PASDIEVINT ELALADLDSC ERAITRQAKR AKGGDADAKF EVSVLEKMRP VLDEGDMLRS
MELSKEELAA VAYLNFLTLK PTMYIANVAE DGFENNPHLD TVREIAAKEN AVVVAVCAAI
ESELAEMDAE DREEFMADLG LEEPGLDRVI RAGYDLLTLQ TYFTAGVKEV RAWTVPVGAS
APKAAGVIHT DFERGFIRAQ VMAYDDFITY KGEAGAKEAG KLRVEGKTYI VKDGDVMHFL
FNV