| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3687 |
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| Symbol | |
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| ID | 6118021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 4491832 |
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| End bp | 4492473 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641635236 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_001762042 |
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| Protein GI | 170728016 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0163127 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.471305 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAATT TGAGCTACTT CACAAAAACC AAGCTTGTCT GGGTGATATT AAGCCTCTCT
TTACTGTCAG CTTGTGCCAC TAAGACTCCC GACAACCTGA TCCCGGTTCA GGTTAATCAT
GTTTCACAAG CCCAAGCTTG GGAGATGCAG GGAAAACTCG CGGTCAGAAC TGCCGATGAT
AAATTTAGTA CCAACCTCTA TTGGCTACAT ACTGCCGATA TTAATGAGCT TAAGTTGACC
ACTATGCTCG GCACCACTTT ACTCTCCTTA ACAACCGAGG AGGGGGTCGC TAAATTAGAG
GTAGACGGAA AAGTGTATCA GCATGATGAC GCTCAAGAGT TGCTAACTGA GATCACAGGT
TGGTCTATCC CTGTTAATGC CCTGCCCCTT TGGATAACAG GGCAAGCAGC TCAAGATGAT
AAAATTATCA ATCAAGATCT CCAGTTAAGA CCCACAGTAT TACTTTCAGA AAAAGACTCA
CCACCTTGGA GGGTCGAGTT TAATAGCTGG CAAAAGCAAA GCGGCGCAGA GATACCAAGG
TTGCTAGAAC TCACCAGAGA GCAACTAAGA CTCAAGATAC AGATAAGCCA ATGGCAGGCA
CTTTCGGCCA CCACTTTAGC GACAAATAAT CAGAAGAAAT GA
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| Protein sequence | MNNLSYFTKT KLVWVILSLS LLSACATKTP DNLIPVQVNH VSQAQAWEMQ GKLAVRTADD
KFSTNLYWLH TADINELKLT TMLGTTLLSL TTEEGVAKLE VDGKVYQHDD AQELLTEITG
WSIPVNALPL WITGQAAQDD KIINQDLQLR PTVLLSEKDS PPWRVEFNSW QKQSGAEIPR
LLELTREQLR LKIQISQWQA LSATTLATNN QKK
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