| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3685 |
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| Symbol | prfA |
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| ID | 6118019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 4489210 |
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| End bp | 4490295 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641635234 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001762040 |
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| Protein GI | 170728014 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0369473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.712251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACA GTGTGATTCG CAAGCTTGAA GGCTTGCTTG AGCGTAACGA AGAGGTTTTG
GCTCTACTTA GCGATCCGAG TGTTATCGCT GATCAGGAGC GTTTTCGTGC GCTTTCTAAA
GAGTATTCTC AGCTTGAAGA TGTCGTTAAG AGCTTCACCG CTTTTCAACA AGCGACAGAA
GATCTTGAAG CTGCAAAAGA GATGCTTAAT GAGGACGACC CTGAGCTAAA AGAGATGGCT
CAAGAGGAGA TGAAGGAAGC TAAATCTGTA CTAGAAACGC TAGAAGATGA GCTCCAGATC
CTGCTGCTTC CTAAAGACCC TAACGATGAT AATAATGCCT TTATCGAGAT CCGTGCTGGT
GCGGGTGGCG ATGAAGCGGC TATCTTTGCT GGCGATCTGT TCCGTATGTA CAGCAAGTAC
TCAGAGAGCA ACCGTTGGCA GATAGAGGTC ATGAACACCA ATGAAGGTGA ACATGGCGGA
TTTAAAGAGG TCATCGCAAA AATTAGCGGT GAAGGTGTTT ACGGTAAACT TAAGTTTGAG
TCCGGTGGAC ACCGAGTTCA ACGTGTGCCA GAAACAGAAT CTCAAGGTCG CGTTCATACT
TCTGCCTGTA CTGTGATTGT TCTGCCTGAA ATTCCAGAAG CAGAAGCGAT TGAAATCAAT
AAGGCCGACT TAAAAGTTGA TACCTTCCGT GCATCGGGTG CCGGTGGTCA GCACGTCAAC
AAAACCGACT CTGCTATTCG TATCACACAT ATCCCGACGG GAATTGTTGT TGAATGTCAG
GATCAACGCT CTCAGCACAA AAACCGTGCT CAAGCCATGA GCGTGCTTTC TGCTCGAATT
CAAGCGGTAG AAGATGAAAA GCGTCGTAGC GAAGAGGAGA GCACTCGCCG TAACTTAGTC
AGTAGTGGCG ATCGTTCTGA ACGTATACGT ACCTACAACT TCCCTCAAGG GCGTATGAGC
GATCACAGAA TCAACCTGAC TCTATATCGC TTAAACGAAG TGATGGAAGG CGTGCTAGAT
GTGATTATCG AGCCATTAAT ATTAGAAAAC CAAGCTGATC TGTTAGCGGC GTTAGCTGAA
GACTAA
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| Protein sequence | MKDSVIRKLE GLLERNEEVL ALLSDPSVIA DQERFRALSK EYSQLEDVVK SFTAFQQATE
DLEAAKEMLN EDDPELKEMA QEEMKEAKSV LETLEDELQI LLLPKDPNDD NNAFIEIRAG
AGGDEAAIFA GDLFRMYSKY SESNRWQIEV MNTNEGEHGG FKEVIAKISG EGVYGKLKFE
SGGHRVQRVP ETESQGRVHT SACTVIVLPE IPEAEAIEIN KADLKVDTFR ASGAGGQHVN
KTDSAIRITH IPTGIVVECQ DQRSQHKNRA QAMSVLSARI QAVEDEKRRS EEESTRRNLV
SSGDRSERIR TYNFPQGRMS DHRINLTLYR LNEVMEGVLD VIIEPLILEN QADLLAALAE
D
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