| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_3654 |
|---|
| Symbol | |
|---|
| ID | 6117988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella woodyi ATCC 51908 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010506 |
|---|
| Strand | - |
|---|
| Start bp | 4450536 |
|---|
| End bp | 4452005 |
|---|
| Gene Length | 1470 bp |
|---|
| Protein Length | 489 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641635205 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001762011 |
|---|
| Protein GI | 170727985 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0466355 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATGA ATACCCGTAA AACAGCACTT TGTAGCGTAT TAGTACCTAT AATCATAGGG
TTGCTACAAG CATGTTCACC AACAAACGAA TCGGTTACGT CTCAGGTTGT CGCCATAGCT
ACTGAGCCTG GCCCTGAGTC AGTCGAAAAG GCTCAGAAAC AACCTAATAT TTTATTGTTG
TTTGCAGATG ATCTGGGCTG GACAGACTTA GGTTACCGCA CGGCTCGTTG GGATACACCA
AACATAGATA GTTTGAAAAA TCAAAGTCTT GAGTTTACTC GGGCTTATGT TGCATCGCCC
ACCTGTAGCC CGAGTCGTGC CTCTGTTATC ACTGGGCAAC ACCCCGCGAG ACTGAAGATG
CCAAGGCATA TTCCCGATGG CAAAACTGAG CTAGGTTTTG ATAAGTTTCA TCGAGCGACG
AAAGAGTTTC ATCTGTTGCC GACAGATCCT GCTCAAGAAC CCTCCAGGAA CTATCTACCG
CTGGAGGTGA CATCCATCGC CGAAGCGGTT AAGCCTTTAG GTTATTACAC AGCGTTTTCT
GGGAAATGGC ACCTGGGATC AGAGGATTAT TTTCCAATAA AGCAGGGCTT TGATGAGCAG
TTCGGAGTAT CGACAGCAGG TCACCCTAAG AGTTATCACG CACCATTTTG GGAAGCATAT
CGTAACCCCT ATCCCGATGC ACCCAAAGGT AAGAATCTAA CCGAACGTTT AACCGATGAT
GTTGTGAACT TTATCAATGG TTACGATAAA GATCAGCCCT TTATGTTGAC TAATTTCTAC
TACTCAGTGC ATACACCGCA TCAAGGGCCA AAGGCGGCTA CTCAAAAATA TTTAGACCGA
GGTTTAGATA AGAGGTATGC AAATTTCGGT AGTATGGTTG AGTCTTTAGA CACCTCAGTC
GGTCGTATTC TACAAGCCTT GGAAGATTCA GGACAAGCGG ACAATACCGT TGTTATTTTT
TACTCAGATC AAGGCGGATA CTTTACCAAC GCCCCTCTTC GCGGAGGCAA AATTGGAGGC
AGAGCCTTGT ATGAAGGCGG TGCCAGAGTG CCGCTCATAG TGCGTTGGCC TGGGGTCACA
CCTAACTCGC AAATATCAGA GCAGTTGGTG CTATCAACAG ATATCCTACC TACATTTGTC
GATATTGCCG GTGGAGACCC ATCAAGTTTT AAAGAGTTGG ACGGTGAAAG CATAGTACCT
ATGTTGAAGG GAGAGGTATC AAGTCGCGAA CATGTGATCT TATATCGCAA CTATGAAGAT
GCGTATGCTG CCGTTATTGG CAAACGTTGG AAGTTGGTTG CTTTTGTCTC TGGTAAAACT
GAACTTTATG ATCTGCTCAC CGATCCTGCT GAAACCACTG ATATCTCTAA GCAGCAACCG
GAGCGTGTCG CTCAGTTAAA GCAAACCCTA TTAGAGTGGC AGATGGATGT GGGAGTTAAC
CCAATACTTA AACGACCAGA TCTGCTCTGA
|
|---|
| Protein sequence | MTMNTRKTAL CSVLVPIIIG LLQACSPTNE SVTSQVVAIA TEPGPESVEK AQKQPNILLL
FADDLGWTDL GYRTARWDTP NIDSLKNQSL EFTRAYVASP TCSPSRASVI TGQHPARLKM
PRHIPDGKTE LGFDKFHRAT KEFHLLPTDP AQEPSRNYLP LEVTSIAEAV KPLGYYTAFS
GKWHLGSEDY FPIKQGFDEQ FGVSTAGHPK SYHAPFWEAY RNPYPDAPKG KNLTERLTDD
VVNFINGYDK DQPFMLTNFY YSVHTPHQGP KAATQKYLDR GLDKRYANFG SMVESLDTSV
GRILQALEDS GQADNTVVIF YSDQGGYFTN APLRGGKIGG RALYEGGARV PLIVRWPGVT
PNSQISEQLV LSTDILPTFV DIAGGDPSSF KELDGESIVP MLKGEVSSRE HVILYRNYED
AYAAVIGKRW KLVAFVSGKT ELYDLLTDPA ETTDISKQQP ERVAQLKQTL LEWQMDVGVN
PILKRPDLL
|
|---|
| |