Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_3646 |
Symbol | |
ID | 6117980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | - |
Start bp | 4439584 |
End bp | 4440069 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641635197 |
Product | putative nucleotide-binding protein |
Protein accession | YP_001762003 |
Protein GI | 170727977 |
COG category | [S] Function unknown |
COG ID | [COG1666] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.507653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0694826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCAA TGGATATAGT TTCAGAAGTC GATGAAGTTG AATTAAGAAA TGCGGTAGAC AACTCGGTTC GTGAACTTAA GAGTCGTTTC GATTTTCGTG GTAAAGATGC AAGCATTGAA TACAAAGACC ATGTGGTAAC ACTCTCTGCT GAAGATGATT TTCAGTGTCA GCAGCTGGTT GATATTTTAC GTATGCAGCT GAGTAAGCGT AATGTCGATC CCGCTTCGAT GGATGTGGAT GATAAATCGG TACACAGTGG CAAGACGTTC TCATTAAAGG TTCGCTTTAA AGAGGGGATT GAGGTTCTGA CAGCTAAGAA GCTGGTGAAG ATAATTAAAG ACAGCAAGTT GAAAGTACAA TCTTCAATTC AGGGCGACTC TGTTCGTGTC ACAGGTAAGA AGCGTGATGA TCTACAAGCT GTTATGACAC TGGCTCGAGA GTCAGGCTTA GATCAGCCAT TCCAGTTTAA TAACTTCCGA GATTAA
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Protein sequence | MPSMDIVSEV DEVELRNAVD NSVRELKSRF DFRGKDASIE YKDHVVTLSA EDDFQCQQLV DILRMQLSKR NVDPASMDVD DKSVHSGKTF SLKVRFKEGI EVLTAKKLVK IIKDSKLKVQ SSIQGDSVRV TGKKRDDLQA VMTLARESGL DQPFQFNNFR D
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