Gene Swoo_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_3646 
Symbol 
ID6117980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4439584 
End bp4440069 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content42% 
IMG OID641635197 
Productputative nucleotide-binding protein 
Protein accessionYP_001762003 
Protein GI170727977 
COG category[S] Function unknown 
COG ID[COG1666] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.507653 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0694826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCAA TGGATATAGT TTCAGAAGTC GATGAAGTTG AATTAAGAAA TGCGGTAGAC 
AACTCGGTTC GTGAACTTAA GAGTCGTTTC GATTTTCGTG GTAAAGATGC AAGCATTGAA
TACAAAGACC ATGTGGTAAC ACTCTCTGCT GAAGATGATT TTCAGTGTCA GCAGCTGGTT
GATATTTTAC GTATGCAGCT GAGTAAGCGT AATGTCGATC CCGCTTCGAT GGATGTGGAT
GATAAATCGG TACACAGTGG CAAGACGTTC TCATTAAAGG TTCGCTTTAA AGAGGGGATT
GAGGTTCTGA CAGCTAAGAA GCTGGTGAAG ATAATTAAAG ACAGCAAGTT GAAAGTACAA
TCTTCAATTC AGGGCGACTC TGTTCGTGTC ACAGGTAAGA AGCGTGATGA TCTACAAGCT
GTTATGACAC TGGCTCGAGA GTCAGGCTTA GATCAGCCAT TCCAGTTTAA TAACTTCCGA
GATTAA
 
Protein sequence
MPSMDIVSEV DEVELRNAVD NSVRELKSRF DFRGKDASIE YKDHVVTLSA EDDFQCQQLV 
DILRMQLSKR NVDPASMDVD DKSVHSGKTF SLKVRFKEGI EVLTAKKLVK IIKDSKLKVQ
SSIQGDSVRV TGKKRDDLQA VMTLARESGL DQPFQFNNFR D